Detailed information NTG0534537

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: JQM34_RS06010
• Genome accession: NZ_CP069427
• Coordinates: 1275802..1276236 (-)
• Length: 144 a.a.
• NCBI ID: WP_200370535.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain SF100
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1270802..1281236

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQM34_RS05975 (JQM34_0001218)	rnpA	1271325..1271696 (-)	372	WP_000748120.1	ribonuclease P protein component	-
JQM34_RS05980 (JQM34_0001219)	-	1271846..1273036 (-)	1191	WP_049490206.1	acetate kinase	-
JQM34_RS05985 (JQM34_0001220)	comYH	1273087..1274040 (-)	954	WP_049490205.1	class I SAM-dependent methyltransferase	Machinery gene
JQM34_RS05990 (JQM34_0001221)	-	1274099..1274689 (-)	591	WP_049490204.1	class I SAM-dependent methyltransferase	-
JQM34_RS05995 (JQM34_0001222)	comGG/cglG	1274722..1275135 (-)	414	WP_070568123.1	competence type IV pilus minor pilin ComGG	Machinery gene
JQM34_RS06000 (JQM34_0001223)	comGF/cglF	1275113..1275574 (-)	462	WP_070568120.1	competence type IV pilus minor pilin ComGF	Machinery gene
JQM34_RS06005 (JQM34_0001224)	comGE/cglE	1275537..1275839 (-)	303	WP_200370534.1	competence type IV pilus minor pilin ComGE	Machinery gene
JQM34_RS06010 (JQM34_0001225)	comGD/cglD	1275802..1276236 (-)	435	WP_200370535.1	competence type IV pilus minor pilin ComGD	Machinery gene
JQM34_RS06015 (JQM34_0001226)	comGC/cglC	1276199..1276522 (-)	324	WP_200370536.1	competence type IV pilus major pilin ComGC	Machinery gene
JQM34_RS06020 (JQM34_0001227)	comGB/cglB	1276524..1277540 (-)	1017	WP_000355379.1	competence type IV pilus assembly protein ComGB	Machinery gene
JQM34_RS06025	comGA	1277488..1278428 (-)	941	Protein_1185	competence type IV pilus ATPase ComGA	-
JQM34_RS06030 (JQM34_0001230)	-	1278498..1278863 (-)	366	WP_000286396.1	DUF1033 family protein	-
JQM34_RS06035 (JQM34_0001231)	nagA	1279018..1280169 (-)	1152	WP_001134447.1	N-acetylglucosamine-6-phosphate deacetylase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15843.31 Da
• Isoelectric Point: 10.6253

>NTDB_id=534537 JQM34_RS06010 WP_200370535.1 1275802..1276236(-) (comGD/cglD) [Streptococcus oralis strain SF100]
MQNKKPVKRLQIKAFTMLESLLVLGLVSILALGLSGSVQSSFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQA
ISNGSQKLTVPKGIQAPSGQSIIFDRSGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=534537 JQM34_RS06010 WP_200370535.1 1275802..1276236(-) (comGD/cglD) [Streptococcus oralis strain SF100]
ATGCAAAACAAAAAACCAGTCAAACGGTTGCAGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTAGTTTTGGGACTTGT
GAGTATCCTTGCTTTGGGCTTGTCCGGTTCTGTTCAGTCCAGTTTTGCGGCGGTAGAGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACGCAAAAACGCAGTGTTGCCAGTCAGCAAAAGACTAGTCTAAACTTAGATGGGCAGGCA
ATCAGCAATGGTAGTCAAAAGTTGACCGTTCCTAAAGGGATTCAGGCACCATCAGGACAAAGTATTATATTTGACCGATC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACTAGCAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACTAAAAATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	93.75	100	0.938
comGD/cglD	Streptococcus pneumoniae Rx1	96.241	92.361	0.889
comGD/cglD	Streptococcus pneumoniae D39	96.241	92.361	0.889
comGD/cglD	Streptococcus pneumoniae R6	96.241	92.361	0.889
comGD/cglD	Streptococcus mitis SK321	94.737	92.361	0.875
comGD/cglD	Streptococcus pneumoniae TIGR4	94.737	92.361	0.875
comYD	Streptococcus gordonii str. Challis substr. CH1	56.061	91.667	0.514
comYD	Streptococcus mutans UA140	48.062	89.583	0.431
comYD	Streptococcus mutans UA159	48.062	89.583	0.431