Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   MHHHKEFG_RS14240 Genome accession   NZ_CP069125
Coordinates   2776755..2776895 (-) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus pumilus strain D5     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2771755..2781895
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHHHKEFG_RS14215 (MHHHKEFG_02899) - 2772021..2772410 (-) 390 WP_003213775.1 hotdog fold thioesterase -
  MHHHKEFG_RS14220 (MHHHKEFG_02900) comA 2772434..2773075 (-) 642 WP_060597210.1 response regulator transcription factor Regulator
  MHHHKEFG_RS14225 (MHHHKEFG_02901) comP 2773156..2775468 (-) 2313 WP_066030466.1 ATP-binding protein Regulator
  MHHHKEFG_RS14230 (MHHHKEFG_02902) comX 2775525..2775692 (-) 168 WP_081311380.1 competence pheromone ComX -
  MHHHKEFG_RS14235 (MHHHKEFG_02903) - 2775689..2776603 (-) 915 WP_081311379.1 polyprenyl synthetase family protein -
  MHHHKEFG_RS14240 degQ 2776755..2776895 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  MHHHKEFG_RS14245 (MHHHKEFG_02905) - 2777401..2777754 (+) 354 WP_060597216.1 hypothetical protein -
  MHHHKEFG_RS14250 (MHHHKEFG_02906) - 2777788..2779014 (-) 1227 WP_060597217.1 EAL and HDOD domain-containing protein -
  MHHHKEFG_RS14255 (MHHHKEFG_02907) - 2779153..2780622 (-) 1470 WP_034659831.1 nicotinate phosphoribosyltransferase -
  MHHHKEFG_RS14260 (MHHHKEFG_02908) - 2780640..2781191 (-) 552 WP_060597218.1 cysteine hydrolase family protein -
  MHHHKEFG_RS14265 (MHHHKEFG_02909) - 2781252..2781659 (-) 408 WP_060597219.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=532404 MHHHKEFG_RS14240 WP_003213123.1 2776755..2776895(-) (degQ) [Bacillus pumilus strain D5]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=532404 MHHHKEFG_RS14240 WP_003213123.1 2776755..2776895(-) (degQ) [Bacillus pumilus strain D5]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAATTATTATGGAAACTTGAAAACGAAATTAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696