Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   JNE42_RS08720 Genome accession   NZ_CP069098
Coordinates   1706307..1707557 (+) Length   416 a.a.
NCBI ID   WP_159159630.1    Uniprot ID   A0A653R129
Organism   Bacillus altitudinis strain 63-2-2     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1701307..1712557
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNE42_RS08695 (JNE42_08695) ymfI 1702719..1703447 (+) 729 WP_203144339.1 elongation factor P 5-aminopentanone reductase -
  JNE42_RS08700 (JNE42_08700) - 1703520..1703777 (+) 258 WP_003211590.1 DUF3243 domain-containing protein -
  JNE42_RS08705 (JNE42_08705) - 1703909..1704700 (+) 792 WP_003211480.1 DUF3388 domain-containing protein -
  JNE42_RS08710 (JNE42_08710) - 1704724..1705635 (+) 912 WP_159159628.1 helix-turn-helix domain-containing protein -
  JNE42_RS08715 (JNE42_08715) pgsA 1705709..1706290 (+) 582 WP_159159629.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  JNE42_RS08720 (JNE42_08720) cinA 1706307..1707557 (+) 1251 WP_159159630.1 competence/damage-inducible protein A Machinery gene
  JNE42_RS08725 (JNE42_08725) recA 1707735..1708778 (+) 1044 WP_007499478.1 recombinase RecA Machinery gene
  JNE42_RS08730 (JNE42_08730) rny 1709079..1710641 (+) 1563 WP_003211958.1 ribonuclease Y -
  JNE42_RS08735 (JNE42_08735) - 1710731..1711525 (+) 795 WP_019744184.1 TIGR00282 family metallophosphoesterase -
  JNE42_RS08740 (JNE42_08740) spoVS 1711728..1711988 (+) 261 WP_003211281.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 416 a.a.        Molecular weight: 45613.74 Da        Isoelectric Point: 4.9193

>NTDB_id=532324 JNE42_RS08720 WP_159159630.1 1706307..1707557(+) (cinA) [Bacillus altitudinis strain 63-2-2]
MKSERKAEIIAVGSELLLGQITNTNAQFISKQLAEIGVNVYYHTAVGDNPERLKRAIQVAQERSNFIIFSGGLGPTKDDL
TKETIASTLGKELVLNEEAFESIQEYFRKTGRDMSPNNRKQALVLEGSDVLVNRFGMAPGMFIQEGDTFYILLPGPPSEL
HPMFENEAKPLISEKLGLKEKIVSVVLRFFGIGESQLETDLEDLIDAQTNPTIAPLAADGEVTLRLTAKHEDEKETERLL
KETEAQILERVGEYFYGYGNTSLAFEASKALHEHGKTVAAAESLTGGMFSEWLTDLEGASSILNGSVVCYTNQVKQQVLG
CREETLSSHGAVSKECALELAEGVRKLTGSDIGISFTGVAGPEPHEGQPVGKVFIGLSTKDQTDVFEWMFTGSRSGIRKR
AVKYGLHHLIKLLKDS

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=532324 JNE42_RS08720 WP_159159630.1 1706307..1707557(+) (cinA) [Bacillus altitudinis strain 63-2-2]
TTGAAGTCAGAGAGAAAAGCAGAAATTATTGCAGTCGGTTCCGAACTTTTGCTAGGGCAAATTACGAATACGAATGCACA
ATTCATCAGCAAACAACTAGCTGAAATTGGTGTGAATGTTTATTACCACACAGCAGTTGGTGACAATCCAGAGCGTTTAA
AAAGGGCCATTCAAGTGGCACAGGAAAGATCGAATTTTATTATCTTCTCAGGTGGTCTTGGACCAACGAAAGACGATTTA
ACAAAAGAAACCATTGCGAGTACGCTCGGTAAAGAGCTTGTGCTAAATGAAGAAGCATTTGAGTCTATTCAAGAATACTT
CCGTAAAACCGGACGTGATATGTCGCCGAACAACCGTAAACAGGCGCTCGTTCTAGAGGGATCTGATGTGCTCGTAAACC
GTTTCGGAATGGCACCTGGTATGTTTATACAAGAGGGAGATACGTTTTACATTCTGCTCCCTGGACCGCCAAGTGAATTG
CACCCGATGTTTGAAAACGAAGCGAAGCCGCTTATTTCTGAAAAACTCGGCCTAAAGGAAAAAATCGTGTCTGTTGTCTT
GCGTTTCTTTGGCATCGGTGAATCTCAGCTGGAAACAGATCTTGAAGATTTAATTGATGCACAGACCAATCCGACGATTG
CACCGCTTGCAGCTGACGGGGAAGTGACGCTAAGGCTGACAGCCAAGCATGAGGATGAAAAAGAAACAGAGCGTCTGTTA
AAAGAAACAGAAGCACAAATTTTAGAACGGGTCGGCGAGTACTTCTACGGATATGGTAATACATCTCTTGCCTTTGAAGC
TTCAAAGGCCTTGCATGAACACGGGAAAACAGTAGCAGCGGCTGAAAGCCTGACTGGTGGTATGTTTTCAGAGTGGCTGA
CAGATCTCGAAGGGGCATCATCCATTTTAAACGGCAGTGTGGTTTGTTACACAAATCAAGTCAAGCAGCAAGTGCTGGGC
TGCCGTGAAGAAACATTGTCTTCTCATGGTGCTGTCAGCAAAGAGTGTGCGTTAGAGCTCGCAGAAGGCGTTAGAAAACT
GACGGGAAGCGATATCGGTATTAGCTTTACAGGTGTGGCAGGTCCTGAACCACACGAAGGACAGCCGGTTGGAAAAGTAT
TTATCGGGCTATCGACAAAAGACCAGACAGACGTGTTTGAATGGATGTTTACTGGCAGTCGATCAGGCATTCGCAAGCGT
GCTGTGAAATATGGTTTGCACCACCTTATCAAATTATTAAAAGATAGTTAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(262-412)

Damage-inducible protein CinA KH domain (CinA_KH)

(186-257)

Probable molybdopterin binding domain (MoCF_biosynth)

(9-172)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A653R129

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

74.396

99.519

0.74
  cinA Streptococcus mitis SK321

47.981

100

0.486
  cinA Streptococcus pneumoniae TIGR4

47.743

100

0.483
  cinA Streptococcus mitis NCTC 12261

47.743

100

0.483
  cinA Streptococcus pneumoniae Rx1

47.506

100

0.481
  cinA Streptococcus pneumoniae R6

47.506

100

0.481
  cinA Streptococcus pneumoniae D39

47.268

100

0.478
  cinA Streptococcus mutans UA159

48.157

97.837

0.471
  cinA Streptococcus suis isolate S10

43.122

90.865

0.392