Detailed information
Bioinformatically predicted
Overview
| Name | comGA/cglA/cilD | Type | Machinery gene |
| Locus tag | K7G42_RS06310 | Genome accession | NZ_CP082783 |
| Coordinates | 1170590..1170994 (+) | Length | 134 a.a. |
| NCBI ID | WP_003108459.1 | Uniprot ID | A0ABP2SZR2 |
| Organism | Streptococcus parauberis strain KRS02083 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1165590..1175994
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K7G42_RS06290 (K7G42_06245) | - | 1165845..1166992 (+) | 1148 | WP_100190732.1 | IS3 family transposase | - |
| K7G42_RS06295 (K7G42_06250) | - | 1167139..1168137 (-) | 999 | WP_003108464.1 | IS5 family transposase | - |
| K7G42_RS06300 (K7G42_06255) | - | 1168324..1168686 (+) | 363 | WP_003108462.1 | MORN motif family protein | - |
| K7G42_RS06305 (K7G42_06260) | - | 1168683..1170527 (+) | 1845 | WP_003108460.1 | acyltransferase family protein | - |
| K7G42_RS06310 (K7G42_06265) | comGA/cglA/cilD | 1170590..1170994 (+) | 405 | WP_003108459.1 | ATPase, T2SS/T4P/T4SS family | Machinery gene |
| K7G42_RS06315 (K7G42_06270) | - | 1171060..1172058 (+) | 999 | WP_003108458.1 | IS5 family transposase | - |
| K7G42_RS06320 (K7G42_06275) | - | 1172916..1175048 (+) | 2133 | WP_177216636.1 | N-acetylmuramoyl-L-alanine amidase family protein | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15297.77 Da Isoelectric Point: 10.3701
>NTDB_id=529232 K7G42_RS06310 WP_003108459.1 1170590..1170994(+) (comGA/cglA/cilD) [Streptococcus parauberis strain KRS02083]
MIKEIAQRMLKKASDFGASDIYILPARTGFSVVFRKSAHREYDQLLSDAEGQSLISHFKFTAGMNVGEKRRPQLGSCLYE
LADRKCRLRLSSAGDFESRESLVIRILHDTKQPLKFWIEADLPQVKKLVARRGL
MIKEIAQRMLKKASDFGASDIYILPARTGFSVVFRKSAHREYDQLLSDAEGQSLISHFKFTAGMNVGEKRRPQLGSCLYE
LADRKCRLRLSSAGDFESRESLVIRILHDTKQPLKFWIEADLPQVKKLVARRGL
Nucleotide
Download Length: 405 bp
>NTDB_id=529232 K7G42_RS06310 WP_003108459.1 1170590..1170994(+) (comGA/cglA/cilD) [Streptococcus parauberis strain KRS02083]
ATGATAAAGGAAATAGCGCAAAGGATGTTAAAGAAAGCAAGCGATTTTGGGGCAAGTGATATTTACATATTACCCGCCAG
AACAGGATTTTCGGTTGTTTTCAGAAAGTCAGCACATCGTGAATATGATCAGCTCCTGTCAGATGCTGAAGGTCAAAGTC
TCATTTCCCATTTCAAATTTACAGCAGGGATGAATGTAGGTGAGAAGCGCCGGCCACAACTAGGATCTTGCTTGTATGAG
CTTGCAGATAGAAAGTGTCGCTTGCGTCTATCCTCAGCGGGTGACTTTGAAAGTCGCGAAAGTTTGGTGATTCGAATTTT
GCATGACACGAAACAACCACTCAAGTTTTGGATTGAGGCAGATTTACCTCAGGTAAAAAAGTTAGTAGCTAGACGCGGTC
TTTAG
ATGATAAAGGAAATAGCGCAAAGGATGTTAAAGAAAGCAAGCGATTTTGGGGCAAGTGATATTTACATATTACCCGCCAG
AACAGGATTTTCGGTTGTTTTCAGAAAGTCAGCACATCGTGAATATGATCAGCTCCTGTCAGATGCTGAAGGTCAAAGTC
TCATTTCCCATTTCAAATTTACAGCAGGGATGAATGTAGGTGAGAAGCGCCGGCCACAACTAGGATCTTGCTTGTATGAG
CTTGCAGATAGAAAGTGTCGCTTGCGTCTATCCTCAGCGGGTGACTTTGAAAGTCGCGAAAGTTTGGTGATTCGAATTTT
GCATGACACGAAACAACCACTCAAGTTTTGGATTGAGGCAGATTTACCTCAGGTAAAAAAGTTAGTAGCTAGACGCGGTC
TTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA/cglA/cilD | Streptococcus mitis NCTC 12261 |
45.522 |
100 |
0.455 |
| comGA | Lactococcus lactis subsp. cremoris KW2 |
44.444 |
100 |
0.448 |
| comGA/cglA/cilD | Streptococcus pneumoniae D39 |
44.03 |
100 |
0.44 |
| comGA/cglA/cilD | Streptococcus pneumoniae Rx1 |
44.03 |
100 |
0.44 |
| comGA/cglA/cilD | Streptococcus pneumoniae R6 |
44.03 |
100 |
0.44 |
| comGA/cglA/cilD | Streptococcus pneumoniae TIGR4 |
44.03 |
100 |
0.44 |
| comGA | Streptococcus gordonii str. Challis substr. CH1 |
43.284 |
100 |
0.433 |
| comGA/cglA | Streptococcus sobrinus strain NIDR 6715-7 |
43.511 |
97.761 |
0.425 |
| comGA | Streptococcus mutans UA159 |
42.975 |
90.299 |
0.388 |
| comGA | Streptococcus mutans UA140 |
42.975 |
90.299 |
0.388 |