Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   I6J15_RS03615 Genome accession   NZ_CP068056
Coordinates   690792..692051 (+) Length   419 a.a.
NCBI ID   WP_111713037.1    Uniprot ID   -
Organism   Streptococcus lutetiensis strain FDAARGOS_1158     
Function   require for competence (predicted from homology)   
Unclear

Genomic Context

Location: 685792..697051
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J15_RS03595 (I6J15_03595) mutL 686774..688714 (+) 1941 WP_020917598.1 DNA mismatch repair endonuclease MutL -
  I6J15_RS03600 (I6J15_03600) ruvA 688715..689308 (+) 594 WP_020917597.1 Holliday junction branch migration protein RuvA -
  I6J15_RS03605 (I6J15_03605) - 689338..689889 (+) 552 WP_058814328.1 DNA-3-methyladenine glycosylase I -
  I6J15_RS09020 - 690090..690317 (+) 228 WP_233422882.1 MFS transporter -
  I6J15_RS03615 (I6J15_03615) cinA 690792..692051 (+) 1260 WP_111713037.1 competence/damage-inducible protein A Machinery gene
  I6J15_RS03620 (I6J15_03620) recA 692098..693252 (+) 1155 WP_020917594.1 recombinase RecA Machinery gene
  I6J15_RS03625 (I6J15_03625) spx 693450..693848 (+) 399 WP_004233512.1 transcriptional regulator Spx -
  I6J15_RS03630 (I6J15_03630) - 694095..694364 (+) 270 WP_003066890.1 IreB family regulatory phosphoprotein -
  I6J15_RS03635 (I6J15_03635) ruvX 694361..694780 (+) 420 WP_111713036.1 Holliday junction resolvase RuvX -
  I6J15_RS03640 (I6J15_03640) - 694813..695130 (+) 318 WP_111713035.1 DUF1292 domain-containing protein -
  I6J15_RS09285 - 695256..695384 (+) 129 WP_260665378.1 hypothetical protein -
  I6J15_RS03645 (I6J15_03645) - 695427..697001 (+) 1575 WP_111713034.1 DUF2079 domain-containing protein -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 45911.31 Da        Isoelectric Point: 5.3330

>NTDB_id=526675 I6J15_RS03615 WP_111713037.1 690792..692051(+) (cinA) [Streptococcus lutetiensis strain FDAARGOS_1158]
MKAEIIAVGTEILTGQITNTNAQFLSEEFAKLGIDVFFQTAVGDNEERLLSIIDLANKRSDLVVLCGGLGPTEDDLTKQT
LAKYLGRNLVFDEQASKRLNEFFATRPQFTRTANNERQAQLIEGSTPLQNSTGLAVGGVIEVDGVTYVVLPGPPSELKPM
VWDYLVPLLSSDHKQLYSRVLRFFGIGESQLVTVLSDLIDNQTDPTIAPYAKTGEVTLRLSTKADDIESAKEKLDQLEQK
ILSKKTLNSIPLENLLYGYGDDNSMARVVFDLLKKKHKTITAAESLTAGLFQSSIADFSGSSSVFNGGFVTYSIEEKSKM
LQIPLEKLQEHGVVSHFTAEKMAEQSRKLTDADFGIGLTGVAGPDSLEGHPAGTVFIGIATREKVHSIRVLIGGRRRSDV
RHIACLYAFNLVRQALLQD

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=526675 I6J15_RS03615 WP_111713037.1 690792..692051(+) (cinA) [Streptococcus lutetiensis strain FDAARGOS_1158]
ATGAAAGCTGAGATTATCGCTGTAGGAACAGAGATTTTAACAGGACAAATCACAAATACCAATGCGCAATTTTTATCTGA
AGAATTTGCCAAGTTAGGGATTGATGTTTTTTTCCAAACAGCTGTTGGGGACAATGAAGAGCGTCTTTTGTCTATCATTG
ATTTGGCAAATAAGCGTAGCGATTTAGTTGTTCTCTGTGGTGGTTTAGGACCAACTGAGGATGATTTGACAAAGCAAACC
TTAGCAAAATATTTAGGGCGTAACCTGGTCTTTGATGAACAGGCAAGTAAACGTCTAAATGAGTTCTTTGCGACACGTCC
TCAATTTACAAGAACAGCTAACAATGAACGCCAAGCTCAACTGATTGAAGGTTCAACTCCTTTGCAAAATAGCACTGGTT
TGGCTGTAGGTGGAGTGATTGAAGTTGACGGCGTCACTTATGTTGTTCTTCCTGGCCCACCAAGTGAGCTTAAGCCCATG
GTCTGGGATTATTTAGTGCCTTTGTTATCTAGCGACCATAAGCAACTTTATTCACGTGTTTTGCGTTTCTTTGGCATTGG
AGAAAGCCAACTGGTAACTGTTTTATCAGATTTGATTGACAACCAAACTGATCCAACCATTGCGCCATATGCTAAGACAG
GTGAAGTAACGCTGCGTTTGTCAACGAAAGCAGACGACATTGAATCAGCTAAGGAAAAACTAGACCAGCTAGAGCAAAAA
ATTCTTTCTAAGAAGACTTTAAATAGCATTCCGCTTGAGAATTTGCTTTATGGTTACGGTGATGACAATAGTATGGCGCG
TGTTGTTTTTGATTTGCTTAAGAAAAAACACAAGACCATTACAGCTGCAGAAAGTTTAACAGCAGGGCTGTTTCAATCAA
GTATTGCAGACTTCTCAGGCTCTTCATCAGTCTTTAATGGTGGTTTTGTGACTTATAGCATTGAAGAAAAATCAAAAATG
CTTCAGATTCCATTAGAAAAGTTGCAAGAACACGGGGTTGTTAGTCACTTTACAGCTGAGAAAATGGCTGAGCAATCTCG
CAAGTTAACAGATGCTGATTTTGGGATTGGATTGACAGGAGTTGCAGGACCAGATAGCTTAGAAGGTCACCCAGCAGGAA
CAGTTTTCATTGGTATTGCTACTAGAGAAAAAGTTCATTCTATTCGTGTTCTCATAGGTGGACGAAGACGTTCAGACGTG
CGTCATATTGCATGTTTGTATGCTTTTAACTTGGTACGTCAAGCTTTATTACAGGATTAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(263-415)

Damage-inducible protein CinA KH domain (CinA_KH)

(178-242)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus mutans UA159

71.703

99.523

0.714
  cinA Streptococcus mitis SK321

71.36

100

0.714
  cinA Streptococcus mitis NCTC 12261

70.406

100

0.704
  cinA Streptococcus pneumoniae Rx1

69.451

100

0.695
  cinA Streptococcus pneumoniae TIGR4

69.451

100

0.695
  cinA Streptococcus pneumoniae R6

69.451

100

0.695
  cinA Streptococcus pneumoniae D39

69.212

100

0.692
  cinA Streptococcus suis isolate S10

54.087

99.284

0.537
  cinA Bacillus subtilis subsp. subtilis str. 168

45.735

100

0.461