Detailed information NTG0517997

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: ICJ33_RS01965
• Genome accession: NZ_CP066169
• Coordinates: 435117..436442 (+)
• Length: 441 a.a.
• NCBI ID: WP_069672822.1
• Uniprot ID: -
• Organism: Pseudomonas simiae strain K-Hf-L9
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 430117..441442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ICJ33_RS01940 (ICJ33_01940)	-	430206..432668 (-)	2463	WP_010213762.1	penicillin-binding protein 1A	-
ICJ33_RS01945 (ICJ33_28550)	-	432717..432863 (+)	147	WP_021492324.1	hypothetical protein	-
ICJ33_RS01950 (ICJ33_01945)	pilM	432887..433540 (+)	654	WP_021492323.1	type IV pilus assembly protein PilM	-
ICJ33_RS01955 (ICJ33_28555)	-	433537..434091 (+)	555	WP_010213760.1	PilN domain-containing protein	-
ICJ33_RS01960 (ICJ33_01950)	-	434088..435047 (+)	960	WP_198581308.1	pilus assembly protein PilP	-
ICJ33_RS01965 (ICJ33_01955)	pilQ	435117..436442 (+)	1326	WP_069672822.1	type IV pilus secretin PilQ family protein	Machinery gene
ICJ33_RS01970 (ICJ33_01960)	aroK	436447..436965 (+)	519	WP_010213757.1	shikimate kinase AroK	-
ICJ33_RS01975 (ICJ33_01965)	aroB	437091..438191 (+)	1101	WP_198581309.1	3-dehydroquinate synthase	-
ICJ33_RS01980 (ICJ33_01970)	-	438202..439773 (+)	1572	WP_010213754.1	AAA family ATPase	-

Sequence

Protein

• Length: 441 a.a.
• Molecular weight: 47813.78 Da
• Isoelectric Point: 4.8179

>NTDB_id=517997 ICJ33_RS01965 WP_069672822.1 435117..436442(+) (pilQ) [Pseudomonas simiae strain K-Hf-L9]
MAAAVPNRVDLIQLPPPGGTTLNAYTGDKLSLNFQSIELRTALQQIADVAGLNLVASDDVQGSITLRLKDVPWDQALDLV
LQAKGLDKRVKAGVLLVAPSEELAARELLTLESRKQMAELAPLRRELLQVNYAKAADLAKLFQSVTGLEGVTDERGSVAV
DDRTNNIIAYQTVERLEELRRIVAQLDIPVRQVMIEARIVEANVDYDKSLGARWGGRLNRGNWGAGGIAKPPPEGAAPPE
NPPPSPFVDLGSLTGTSGLGIAYITDNLLLDLELTAMEKTGNGEIVSQPKVVTSDKETARILKGTEIPYQESSSSGATSV
SFKEASLSLEVTPQITPDDRVIMEVKVTKDEPDYLNKLNDVPPIKKNEVNAKVLVKDGETIVIGGVFSNTQSKVVDKVPF
LGDVPYLGRLFRRDVLAEKKSELLVFLTPRIMNNQAIAVSR

Nucleotide

• Length: 1326 bp

>NTDB_id=517997 ICJ33_RS01965 WP_069672822.1 435117..436442(+) (pilQ) [Pseudomonas simiae strain K-Hf-L9]
ATGGCTGCTGCTGTGCCCAATCGTGTAGATCTGATCCAGTTGCCGCCTCCCGGCGGTACCACGCTGAACGCCTACACAGG
CGACAAGCTCAGCCTCAACTTCCAGAGCATCGAGTTGCGCACGGCGTTGCAACAAATTGCCGATGTGGCGGGCCTCAATC
TGGTTGCCAGTGACGATGTGCAGGGTTCGATCACCCTGCGCCTCAAGGATGTGCCCTGGGATCAGGCGCTGGACCTGGTG
CTGCAAGCCAAGGGCCTGGACAAGCGGGTGAAGGCCGGCGTGTTGTTGGTGGCGCCGTCCGAGGAACTGGCTGCGCGCGA
GCTGCTCACGCTGGAATCGCGAAAGCAGATGGCCGAGCTGGCGCCGTTGCGCCGCGAGCTGCTGCAAGTCAATTACGCCA
AGGCGGCAGACCTGGCCAAGTTGTTCCAGTCGGTCACCGGCCTTGAGGGCGTGACCGATGAGCGTGGTTCGGTGGCGGTG
GATGATCGCACCAACAACATCATCGCCTACCAGACTGTCGAGCGACTGGAGGAACTGCGACGGATCGTGGCGCAGCTGGA
TATTCCCGTGCGCCAGGTGATGATCGAGGCGCGGATTGTCGAGGCCAATGTCGATTACGACAAAAGCCTGGGTGCGCGCT
GGGGTGGGCGGCTCAATCGGGGTAACTGGGGCGCGGGTGGCATTGCGAAACCTCCGCCTGAGGGCGCCGCACCGCCGGAA
AACCCACCCCCATCACCTTTTGTGGACTTGGGGTCACTCACCGGCACCTCGGGCCTGGGCATTGCCTATATCACCGACAA
CCTGTTGCTGGACCTGGAACTCACCGCCATGGAGAAAACCGGCAACGGCGAAATCGTCTCGCAACCCAAGGTGGTCACTT
CCGACAAAGAAACCGCACGCATCCTCAAGGGCACCGAGATTCCCTACCAGGAATCCAGCTCCAGCGGCGCTACGTCAGTG
TCGTTCAAGGAGGCCTCGCTGTCGTTGGAAGTCACCCCGCAGATCACCCCCGATGACCGCGTGATCATGGAGGTCAAGGT
CACCAAGGATGAGCCCGACTACTTGAACAAACTCAACGACGTGCCGCCGATCAAGAAGAACGAGGTCAACGCCAAGGTAT
TGGTCAAGGATGGCGAGACCATCGTGATCGGCGGAGTTTTCTCCAATACCCAGAGCAAAGTGGTAGATAAAGTGCCATTT
TTGGGCGATGTGCCGTATCTTGGCCGCCTTTTCCGGCGCGATGTGCTGGCGGAGAAAAAATCCGAGCTGCTGGTATTCCT
GACTCCGCGTATTATGAATAACCAGGCGATTGCTGTGAGTCGTTGA

Domains

Predicted by InterproScan.

• Secretin and TonB N terminus short domain (STN) (53-99)

• Bacterial type II/III secretion system short domain (Secretin_N) (127-192)

• Bacterial type II and III secretion system protein (Secretin) (276-432)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Pseudomonas aeruginosa PAK	71.854	99.093	0.712
comQ	Acinetobacter baylyi ADP1	41.127	100	0.447
pilQ	Acinetobacter baumannii D1279779	40.948	100	0.431
pilQ	Acinetobacter baumannii strain A118	40.948	100	0.431
pilQ	Vibrio campbellii strain DS40M4	43.868	96.145	0.422
pilQ	Legionella pneumophila strain Lp02	44.048	95.238	0.42
pilQ	Vibrio cholerae strain A1552	43.78	94.785	0.415
pilQ	Vibrio cholerae O1 biovar El Tor strain E7946	43.78	94.785	0.415
pilQ	Legionella pneumophila strain ERS1305867	43.571	95.238	0.415