Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | I6H43_RS06910 | Genome accession | NZ_CP066092 |
| Coordinates | 1514867..1515187 (+) | Length | 106 a.a. |
| NCBI ID | WP_042031805.1 | Uniprot ID | - |
| Organism | Aeromonas jandaei strain FDAARGOS_986 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1509867..1520187
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6H43_RS06895 (I6H43_06895) | yfbV | 1510345..1510785 (-) | 441 | WP_042031801.1 | terminus macrodomain insulation protein YfbV | - |
| I6H43_RS06900 (I6H43_06900) | - | 1511090..1512292 (+) | 1203 | WP_040065015.1 | acetate kinase | - |
| I6H43_RS06905 (I6H43_06905) | pta | 1512348..1514528 (+) | 2181 | WP_042031804.1 | phosphate acetyltransferase | - |
| I6H43_RS06910 (I6H43_06910) | comEA/comE1 | 1514867..1515187 (+) | 321 | WP_042031805.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| I6H43_RS06915 (I6H43_06915) | galU | 1515283..1516194 (+) | 912 | WP_033114924.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| I6H43_RS06920 (I6H43_06920) | - | 1516408..1517805 (+) | 1398 | WP_042031806.1 | peptide MFS transporter | - |
| I6H43_RS06925 (I6H43_06925) | - | 1517894..1518865 (-) | 972 | WP_041210394.1 | response regulator | - |
| I6H43_RS06930 (I6H43_06930) | - | 1519105..1519794 (+) | 690 | WP_042031807.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11349.30 Da Isoelectric Point: 10.0127
>NTDB_id=517301 I6H43_RS06910 WP_042031805.1 1514867..1515187(+) (comEA/comE1) [Aeromonas jandaei strain FDAARGOS_986]
MRKNSLSIIMLLSALPLFTLPSLAADKVAPKQATTVAAKQEIGKVDINTATLAELTNLKGIGDKKAQAIVDYREKQGKFT
SVDQLVDVNGIGPATLEANRDMIIVK
MRKNSLSIIMLLSALPLFTLPSLAADKVAPKQATTVAAKQEIGKVDINTATLAELTNLKGIGDKKAQAIVDYREKQGKFT
SVDQLVDVNGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=517301 I6H43_RS06910 WP_042031805.1 1514867..1515187(+) (comEA/comE1) [Aeromonas jandaei strain FDAARGOS_986]
ATGCGTAAAAACAGCTTGTCCATCATCATGTTGTTGTCCGCCCTCCCGTTGTTCACCCTGCCCTCACTGGCCGCAGACAA
GGTCGCACCGAAGCAGGCCACCACGGTTGCCGCCAAGCAGGAGATCGGCAAAGTGGATATCAATACGGCAACCCTTGCCG
AGCTCACCAACCTCAAGGGGATTGGCGACAAAAAGGCACAAGCCATCGTCGACTATCGCGAAAAACAGGGAAAATTTACC
TCGGTTGATCAACTGGTTGATGTAAACGGCATCGGCCCGGCCACGCTGGAAGCCAACCGTGACATGATCATCGTCAAATA
A
ATGCGTAAAAACAGCTTGTCCATCATCATGTTGTTGTCCGCCCTCCCGTTGTTCACCCTGCCCTCACTGGCCGCAGACAA
GGTCGCACCGAAGCAGGCCACCACGGTTGCCGCCAAGCAGGAGATCGGCAAAGTGGATATCAATACGGCAACCCTTGCCG
AGCTCACCAACCTCAAGGGGATTGGCGACAAAAAGGCACAAGCCATCGTCGACTATCGCGAAAAACAGGGAAAATTTACC
TCGGTTGATCAACTGGTTGATGTAAACGGCATCGGCCCGGCCACGCTGGAAGCCAACCGTGACATGATCATCGTCAAATA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.826 |
100 |
0.519 |
| comEA | Vibrio cholerae C6706 |
51.456 |
97.17 |
0.5 |
| comEA | Vibrio cholerae strain A1552 |
51.456 |
97.17 |
0.5 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
39.423 |
98.113 |
0.387 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
39.423 |
98.113 |
0.387 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
39.423 |
98.113 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
38.095 |
99.057 |
0.377 |
| comEA/celA/cilE | Streptococcus pneumoniae TIGR4 |
38.235 |
96.226 |
0.368 |