Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   I6H72_RS02335 Genome accession   NZ_CP066055
Coordinates   467617..468321 (-) Length   234 a.a.
NCBI ID   WP_150225670.1    Uniprot ID   -
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 462617..473321
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS02320 (I6H72_02320) - 463176..464162 (-) 987 WP_198458221.1 Gfo/Idh/MocA family protein -
  I6H72_RS10190 - 464607..464747 (-) 141 WP_022525502.1 hypothetical protein -
  I6H72_RS10195 - 464838..465242 (-) 405 WP_006267075.1 DUF805 domain-containing protein -
  I6H72_RS02330 (I6H72_02330) comEC/celB 465405..467633 (-) 2229 WP_020997762.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  I6H72_RS02335 (I6H72_02335) comEA/celA/cilE 467617..468321 (-) 705 WP_150225670.1 helix-hairpin-helix domain-containing protein Machinery gene
  I6H72_RS02340 (I6H72_02340) smpB 468489..468956 (-) 468 WP_006267184.1 SsrA-binding protein SmpB -
  I6H72_RS02345 (I6H72_02345) rnr 469122..471258 (-) 2137 Protein_464 ribonuclease R -
  I6H72_RS02350 (I6H72_02350) secG 471351..471584 (-) 234 WP_003024744.1 preprotein translocase subunit SecG -
  I6H72_RS02355 (I6H72_02355) rpmG 471624..471773 (-) 150 WP_003024746.1 50S ribosomal protein L33 -
  I6H72_RS02360 (I6H72_02360) - 471757..472902 (-) 1146 WP_232619600.1 multidrug efflux MFS transporter -

Sequence


Protein


Download         Length: 234 a.a.        Molecular weight: 25361.75 Da        Isoelectric Point: 8.7260

>NTDB_id=516835 I6H72_RS02335 WP_150225670.1 467617..468321(-) (comEA/celA/cilE) [Streptococcus constellatus strain FDAARGOS_1015]
MLEVIITKIKEYKILVCLSLIGLIIAGFFLMTSKSARQSNVGDIAQEATNAKLERKETSTETKKKQQKEETESQKNLASE
ELEFLTVDVKGAVKNPGIYQLKKTSRINDAIQKAGGLTTDADSKSINLAQKLTDEAVIYVAAMGENVTNAASNNGQTLTT
DTNGTAAQKGNKVNLNKANLSDLQSISGIGQKRAQDILDYREANGKFNSVDDLKNISGVGAKTLEKLKEYVTVD

Nucleotide


Download         Length: 705 bp        

>NTDB_id=516835 I6H72_RS02335 WP_150225670.1 467617..468321(-) (comEA/celA/cilE) [Streptococcus constellatus strain FDAARGOS_1015]
ATGTTAGAGGTAATCATCACAAAAATAAAAGAGTATAAAATTTTAGTTTGTTTAAGCCTGATTGGTTTGATCATAGCAGG
ATTTTTTCTGATGACTAGTAAATCTGCTAGACAATCTAATGTAGGAGATATTGCACAAGAGGCCACAAATGCAAAACTAG
AACGGAAAGAAACTTCAACTGAAACGAAGAAAAAACAACAGAAAGAAGAAACAGAATCTCAAAAGAATTTAGCGAGTGAA
GAATTGGAATTTTTAACTGTAGATGTTAAAGGTGCTGTTAAAAATCCAGGTATTTATCAATTAAAAAAAACAAGCCGAAT
CAATGATGCTATCCAAAAAGCGGGTGGACTAACGACAGACGCTGACAGCAAATCTATCAATTTGGCTCAAAAACTAACAG
ATGAGGCTGTGATTTATGTGGCAGCTATGGGTGAAAATGTAACAAATGCTGCAAGTAATAATGGACAAACTTTAACGACA
GATACCAATGGAACTGCGGCACAAAAAGGGAATAAGGTCAATCTAAATAAGGCCAATTTGTCTGATTTACAGTCTATTTC
TGGTATTGGACAAAAGCGCGCCCAAGATATTTTAGATTATCGTGAGGCAAATGGAAAATTTAATTCTGTTGATGATCTTA
AAAATATATCAGGAGTTGGTGCTAAAACATTAGAGAAATTGAAAGAATATGTCACAGTGGATTAA

Domains


Predicted by InterproScan.

(87-140)

(169-232)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus mitis NCTC 12261

51.073

99.573

0.509

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

50.644

99.573

0.504

  comEA/celA/cilE Streptococcus mitis SK321

50.644

99.573

0.504

  comEA/celA/cilE Streptococcus pneumoniae Rx1

50.215

99.573

0.5

  comEA/celA/cilE Streptococcus pneumoniae D39

50.215

99.573

0.5

  comEA/celA/cilE Streptococcus pneumoniae R6

50.215

99.573

0.5

  comEA Streptococcus thermophilus LMD-9

41.702

100

0.419

  comEA Lactococcus lactis subsp. cremoris KW2

37.339

99.573

0.372