Detailed information NTG0516649

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: I6I32_RS04345
• Genome accession: NZ_CP066041
• Coordinates: 900603..901064 (-)
• Length: 153 a.a.
• NCBI ID: WP_198465000.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain FDAARGOS_1075
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 895603..906064

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6I32_RS04315 (I6I32_04315)	-	896025..896852 (-)	828	WP_000728099.1	membrane protein insertase YidC	-
I6I32_RS04320 (I6I32_04320)	rnpA	896827..897198 (-)	372	WP_045591913.1	ribonuclease P protein component	-
I6I32_RS04325 (I6I32_04325)	-	897348..898538 (-)	1191	WP_000167789.1	acetate kinase	-
I6I32_RS04330 (I6I32_04330)	comYH	898590..899543 (-)	954	WP_198464998.1	class I SAM-dependent methyltransferase	Machinery gene
I6I32_RS04335 (I6I32_04335)	-	899602..900192 (-)	591	WP_198464999.1	class I SAM-dependent methyltransferase	-
I6I32_RS04340 (I6I32_04340)	comGG/cglG	900197..900625 (-)	429	WP_049478131.1	competence type IV pilus minor pilin ComGG	Machinery gene
I6I32_RS04345 (I6I32_04345)	comGF/cglF	900603..901064 (-)	462	WP_198465000.1	competence type IV pilus minor pilin ComGF	Machinery gene
I6I32_RS04350 (I6I32_04350)	comGE/cglE	901027..901329 (-)	303	WP_000413375.1	competence type IV pilus minor pilin ComGE	Machinery gene
I6I32_RS04355 (I6I32_04355)	comGD/cglD	901292..901726 (-)	435	WP_198465001.1	competence type IV pilus minor pilin ComGD	Machinery gene
I6I32_RS04360 (I6I32_04360)	comGC/cglC	901689..902012 (-)	324	WP_000735798.1	competence type IV pilus major pilin ComGC	Machinery gene
I6I32_RS04365 (I6I32_04365)	comGB/cglB	902014..903030 (-)	1017	WP_198465068.1	competence type IV pilus assembly protein ComGB	Machinery gene
I6I32_RS04370 (I6I32_04370)	comGA/cglA/cilD	902978..903919 (-)	942	WP_198465002.1	competence type IV pilus ATPase ComGA	Machinery gene
I6I32_RS04375 (I6I32_04375)	-	903980..904345 (-)	366	WP_000286399.1	DUF1033 family protein	-
I6I32_RS04380 (I6I32_04380)	nagA	904498..905649 (-)	1152	WP_198465003.1	N-acetylglucosamine-6-phosphate deacetylase	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17853.54 Da
• Isoelectric Point: 9.3249

>NTDB_id=516649 I6I32_RS04345 WP_198465000.1 900603..901064(-) (comGF/cglF) [Streptococcus oralis strain FDAARGOS_1075]
MVQRSCWILKSSKVRAFTLLESLIALIVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEAN
HLYVKQDGKDIAMGKSKSDDFRKTDSSGRGYQPMVYGLKSAQITEENQLVRFRFQFQKGLEREFIYRVEKTKS

Nucleotide

• Length: 462 bp

>NTDB_id=516649 I6I32_RS04345 WP_198465000.1 900603..901064(-) (comGF/cglF) [Streptococcus oralis strain FDAARGOS_1075]
ATGGTTCAGAGAAGTTGCTGGATCTTAAAGAGCAGTAAGGTAAGAGCGTTCACTCTATTAGAATCTCTGATTGCCCTTAT
CGTCATTAGCGGAGGCTTGCTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGTTACCAGCAGCAAAGCG
AGCAAAAAGAGTGGCTCTTGTTTGTGGATCAACTGGAGGCAGAGTTAGATCGTTCGCAGTTTGAAAAGGTGGAAGCCAAT
CACCTCTATGTGAAGCAAGATGGCAAGGATATCGCTATGGGCAAGTCCAAATCAGATGATTTTCGGAAAACCGATAGCAG
CGGACGGGGCTACCAACCTATGGTTTATGGACTTAAATCAGCACAAATTACAGAGGAAAATCAATTGGTTCGCTTCCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAACAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus mitis NCTC 12261	88.889	100	0.889
comGF/cglF	Streptococcus mitis SK321	88.889	100	0.889
comGF/cglF	Streptococcus pneumoniae Rx1	87.582	100	0.876
comGF/cglF	Streptococcus pneumoniae D39	87.582	100	0.876
comGF/cglF	Streptococcus pneumoniae R6	87.582	100	0.876
comGF/cglF	Streptococcus pneumoniae TIGR4	87.582	100	0.876
comGF	Lactococcus lactis subsp. cremoris KW2	42.143	91.503	0.386