Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   KW2_RS01950 Genome accession   NC_022369
Coordinates   394332..395144 (-) Length   270 a.a.
NCBI ID   WP_021036728.1    Uniprot ID   -
Organism   Lactococcus cremoris subsp. cremoris KW2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 389332..400144
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KW2_RS01925 (kw2_0389) ytpR 389556..390182 (+) 627 WP_011675461.1 YtpR family tRNA-binding protein -
  KW2_RS01930 (kw2_0390) nox 390344..391684 (+) 1341 WP_011834457.1 H2O-forming NADH oxidase -
  KW2_RS01935 (kw2_0391) ssbB 391775..392164 (+) 390 WP_021036727.1 single-stranded DNA-binding protein Machinery gene
  KW2_RS01940 (kw2_0392) groES 392283..392567 (+) 285 WP_011834459.1 co-chaperone GroES -
  KW2_RS01945 (kw2_0393) groL 392654..394282 (+) 1629 WP_011675465.1 chaperonin GroEL -
  KW2_RS01950 (kw2_0394) vicX 394332..395144 (-) 813 WP_021036728.1 MBL fold metallo-hydrolase Regulator
  KW2_RS01960 (kw2_0395) vicK 395335..396762 (-) 1428 WP_021036729.1 sensor histidine kinase Regulator
  KW2_RS01965 (kw2_0396) yycF 396755..397456 (-) 702 WP_003131580.1 response regulator YycF -
  KW2_RS01970 (kw2_0397) tmk 397634..398269 (+) 636 WP_021036730.1 dTMP kinase -
  KW2_RS01975 (kw2_0398) - 398403..399263 (+) 861 WP_021036731.1 DNA polymerase III subunit delta' -
  KW2_RS01980 (kw2_0399) yaaT 399313..400095 (+) 783 WP_011834464.1 PSP1 domain-containing protein Regulator

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30493.35 Da        Isoelectric Point: 5.5055

>NTDB_id=51645 KW2_RS01950 WP_021036728.1 394332..395144(-) (vicX) [Lactococcus cremoris subsp. cremoris KW2]
MTEQNGFKYSILASGSTGNSFYLETPKKKMLVDAGLSGKKIESLLSEIDRDIHDIDALLITHEHSDHIKGIGVLARKYGI
DLYANEDTWSELDGKNALGKIPLEQKHLFEMGKTMTFGDIDIESFGVSHDAIAPQFYRFMKDDKSFVMLTDTGYVSDRMR
GTIENADAYLMESNHDIEILRMGAYPWRTKQRILSDQGHLSNEDGAEAAFNIHGNKTKKIFLGHLSLNNNIKELAHLTMD
GYLQQHDVDTKNELKILDTSHEHASPLYDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=51645 KW2_RS01950 WP_021036728.1 394332..395144(-) (vicX) [Lactococcus cremoris subsp. cremoris KW2]
ATGACTGAACAAAATGGCTTTAAATATTCCATTCTAGCCTCTGGATCAACTGGAAATTCCTTCTACTTAGAAACTCCTAA
GAAAAAAATGCTTGTTGATGCCGGACTATCTGGAAAAAAAATAGAAAGTTTACTCTCGGAGATTGACCGTGATATCCATG
ATATTGATGCACTTTTAATTACGCACGAACATAGTGACCATATCAAAGGAATTGGTGTGCTCGCCCGTAAATATGGGATT
GACCTTTATGCGAATGAAGATACATGGTCTGAACTTGATGGTAAAAACGCTTTAGGAAAAATTCCTCTTGAGCAAAAACA
TCTTTTTGAGATGGGAAAAACGATGACATTTGGTGATATTGATATTGAATCTTTTGGTGTCAGCCATGATGCTATTGCCC
CACAATTTTATCGTTTCATGAAAGATGATAAAAGTTTCGTTATGTTGACTGATACAGGATATGTTTCAGATCGTATGCGT
GGAACCATTGAAAATGCTGATGCTTATCTAATGGAGTCTAATCATGACATTGAAATTCTAAGAATGGGTGCCTATCCTTG
GCGAACAAAACAACGTATTCTAAGTGACCAAGGTCATTTATCTAACGAAGATGGTGCCGAAGCAGCCTTTAACATTCATG
GGAATAAAACAAAAAAAATATTTTTGGGACACTTAAGTCTAAATAATAATATTAAAGAACTTGCTCATCTTACCATGGAC
GGTTATCTCCAACAACACGATGTGGATACAAAAAATGAATTAAAAATTCTTGATACCAGCCATGAACATGCAAGTCCCCT
TTATGATATCTAA

Domains

Predicted by InterProScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(30-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

68.519

100

0.685

Multiple sequence alignment