Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | KUU68_RS25065 | Genome accession | NZ_CP078002 |
| Coordinates | 5400191..5400655 (-) | Length | 154 a.a. |
| NCBI ID | WP_023129290.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain QZPH21 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5395191..5405655
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KUU68_RS25050 (KUU68_25045) | nadC | 5397691..5398539 (+) | 849 | WP_003116246.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| KUU68_RS25060 (KUU68_25055) | - | 5398720..5400033 (-) | 1314 | WP_223697243.1 | O-antigen ligase family protein | - |
| KUU68_RS25065 (KUU68_25060) | pilA/pilAI | 5400191..5400655 (-) | 465 | WP_023129290.1 | pilin | Machinery gene |
| KUU68_RS25070 (KUU68_25065) | pilB | 5400886..5402586 (+) | 1701 | WP_003107297.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| KUU68_RS25075 (KUU68_25070) | pilC | 5402590..5403807 (+) | 1218 | WP_003161763.1 | type II secretion system F family protein | Machinery gene |
| KUU68_RS25080 (KUU68_25075) | pilD | 5403808..5404680 (+) | 873 | WP_023084740.1 | type IV prepilin peptidase/methyltransferase PilD | Machinery gene |
| KUU68_RS25085 (KUU68_25080) | coaE | 5404677..5405288 (+) | 612 | WP_003112838.1 | dephospho-CoA kinase | - |
| KUU68_RS25090 (KUU68_25085) | yacG | 5405285..5405485 (+) | 201 | WP_003094656.1 | DNA gyrase inhibitor YacG | - |
Sequence
Protein
Download Length: 154 a.a. Molecular weight: 16148.47 Da Isoelectric Point: 8.9986
>NTDB_id=512991 KUU68_RS25065 WP_023129290.1 5400191..5400655(-) (pilA/pilAI) [Pseudomonas aeruginosa strain QZPH21]
MKAQKGFTLIELMIVVAIIGILAAIAIPQYQDYTARTQVTRAVSEISALKTAAESAILEGKKLVSNDSPKNDEYDLGFTS
STLLTGDGKGQIKIDKADTATPEISGTLGRSSGKGIAGAVITVKRDDKGVWTCGITGSPTNWKANYAPANCPKS
MKAQKGFTLIELMIVVAIIGILAAIAIPQYQDYTARTQVTRAVSEISALKTAAESAILEGKKLVSNDSPKNDEYDLGFTS
STLLTGDGKGQIKIDKADTATPEISGTLGRSSGKGIAGAVITVKRDDKGVWTCGITGSPTNWKANYAPANCPKS
Nucleotide
Download Length: 465 bp
>NTDB_id=512991 KUU68_RS25065 WP_023129290.1 5400191..5400655(-) (pilA/pilAI) [Pseudomonas aeruginosa strain QZPH21]
ATGAAAGCTCAGAAGGGTTTTACTCTGATCGAACTGATGATCGTGGTCGCGATCATCGGCATCCTGGCCGCCATTGCCAT
CCCGCAATACCAGGACTACACCGCCCGTACCCAGGTGACCCGTGCCGTGAGTGAAATCAGCGCGCTGAAGACCGCTGCGG
AGTCGGCGATTCTGGAAGGCAAGAAGCTCGTTTCCAACGATTCTCCCAAAAACGATGAGTATGATCTTGGCTTTACCAGT
TCTACTCTGCTTACCGGTGACGGTAAGGGGCAGATCAAGATTGACAAAGCTGATACCGCAACTCCGGAGATTTCTGGTAC
CTTGGGCCGCTCTTCTGGTAAAGGTATTGCTGGCGCTGTCATCACTGTCAAGCGTGATGATAAAGGAGTATGGACCTGCG
GCATCACTGGTTCGCCGACCAACTGGAAAGCCAACTACGCTCCGGCCAATTGCCCGAAATCCTAA
ATGAAAGCTCAGAAGGGTTTTACTCTGATCGAACTGATGATCGTGGTCGCGATCATCGGCATCCTGGCCGCCATTGCCAT
CCCGCAATACCAGGACTACACCGCCCGTACCCAGGTGACCCGTGCCGTGAGTGAAATCAGCGCGCTGAAGACCGCTGCGG
AGTCGGCGATTCTGGAAGGCAAGAAGCTCGTTTCCAACGATTCTCCCAAAAACGATGAGTATGATCTTGGCTTTACCAGT
TCTACTCTGCTTACCGGTGACGGTAAGGGGCAGATCAAGATTGACAAAGCTGATACCGCAACTCCGGAGATTTCTGGTAC
CTTGGGCCGCTCTTCTGGTAAAGGTATTGCTGGCGCTGTCATCACTGTCAAGCGTGATGATAAAGGAGTATGGACCTGCG
GCATCACTGGTTCGCCGACCAACTGGAAAGCCAACTACGCTCCGGCCAATTGCCCGAAATCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.516 |
100 |
0.448 |
| pilA | Acinetobacter baumannii strain A118 |
42.857 |
100 |
0.429 |
| pilA | Pseudomonas aeruginosa PAK |
41.139 |
100 |
0.422 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
37.059 |
100 |
0.409 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
39.073 |
98.052 |
0.383 |
| pilA | Vibrio cholerae strain A1552 |
39.073 |
98.052 |
0.383 |
| pilA | Vibrio cholerae C6706 |
39.073 |
98.052 |
0.383 |
| pilA2 | Legionella pneumophila str. Paris |
37.838 |
96.104 |
0.364 |