Detailed information NTG0504782

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: IMX31_RS02840
• Genome accession: NZ_CP064793
• Coordinates: 541829..544186 (+)
• Length: 785 a.a.
• NCBI ID: WP_195781818.1
• Uniprot ID: -
• Organism: Priestia megaterium strain IGA-FME-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 536829..549186

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IMX31_RS02820	cymR	538186..538602 (+)	417	WP_013059297.1	cysteine metabolism transcriptional regulator CymR	-
IMX31_RS02825	-	538626..539768 (+)	1143	WP_195781815.1	cysteine desulfurase family protein	-
IMX31_RS02830	mnmA	539875..540987 (+)	1113	WP_195781816.1	tRNA 2-thiouridine(34) synthase MnmA	-
IMX31_RS02835	-	541145..541804 (+)	660	WP_195781817.1	tetratricopeptide repeat protein	-
IMX31_RS02840	recD2	541829..544186 (+)	2358	WP_195781818.1	ATP-dependent RecD-like DNA helicase	Machinery gene
IMX31_RS02845	-	544328..544519 (+)	192	WP_013059292.1	hypothetical protein	-
IMX31_RS02850	-	544545..544679 (+)	135	WP_013059291.1	YrzQ family protein	-
IMX31_RS02855	-	544794..545855 (+)	1062	WP_195781819.1	AI-2E family transporter	-
IMX31_RS02860	alaS	546244..548877 (+)	2634	WP_013085088.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 785 a.a.
• Molecular weight: 88849.28 Da
• Isoelectric Point: 5.0274

>NTDB_id=504782 IMX31_RS02840 WP_195781818.1 541829..544186(+) (recD2) [Priestia megaterium strain IGA-FME-1]
MNEELVNPSQPERHYISGTSIVTVFHNEENLYNVTRIRIKKTNLEIEDKETVVTGYFPKLNEDETYTFYGDFKEHPKFGL
QFHVEQFKKELPQSRQGVVQYLSSDLFHGIGKKTAENIVDALGERAIFRILQNESVLKEVPRLSADKAEALVTQLREHQG
LEEVMVKLTDLGFGPQLSMKIFQAYKQEALEIVQNNPYQLVEDIQGIGFSRADELGKRLGMATNHPDRLRAGILYVIEQE
CNQMGHVYVTADQLYGKTAELLRKSRHENLSEMDLTREVDALKEDKKLIIQDEKIYFPPLFYAEKGLVKAIQKIMAQTQY
EEQFPESEFLLALGELEERLDVQYAPSQRKGIQTALMSPMLLLTGGPGTGKTTVIKGIVELYAELHGCSLNPGDYKKDEA
FPVLLVAPTGRAAKRMSEATGLPAVTIHRLLKWNGQEGFDHNEENPIDGKLLIVDEVSMVDLWLAHQLFKSLPANLQVIL
VGDEDQLPSVGPGQVLKDLLSSEVVPTVRLTDVYRQAEGSSIIDLAHEIKKGKLPEDLSKQQGDRSFIRCQGQHITNVVQ
QVCGNALKKGYTAKDIQVLAPMYKGPAGIDKLNEVLQELFNPASEQRRELKHGDITYRVGDKVLQLVNQPDSNVFNGDMG
EIVSVFFAKENTEKQDMLVISYEGNEVTYTKQDFNQITHAYCCSIHKSQGSEFPIVVLPIVKSYYRMLRRNLLYTAVTRS
KQFLILCGEDEAFQLGVSRNEDSVRQTNLQPLLRESLDNDIEDPEIPFMKDANIGMENVTPYDFM

Nucleotide

• Length: 2358 bp

>NTDB_id=504782 IMX31_RS02840 WP_195781818.1 541829..544186(+) (recD2) [Priestia megaterium strain IGA-FME-1]
ATGAACGAAGAACTAGTGAACCCTTCACAGCCAGAACGTCATTATATAAGCGGCACGTCGATTGTAACCGTCTTTCATAA
CGAAGAAAACTTGTATAACGTTACGCGGATACGGATCAAAAAAACAAATTTAGAGATTGAAGATAAAGAAACGGTCGTCA
CAGGTTATTTTCCTAAGCTGAATGAAGATGAAACATACACGTTTTACGGAGACTTCAAAGAGCATCCAAAGTTTGGTCTG
CAGTTCCATGTTGAACAGTTTAAAAAAGAACTTCCACAATCAAGGCAAGGGGTTGTTCAGTACCTATCTAGTGATTTATT
TCACGGAATTGGTAAAAAAACCGCTGAAAATATTGTAGACGCCTTAGGAGAACGCGCTATCTTTCGTATTTTACAAAATG
AGTCTGTGCTAAAAGAGGTTCCGAGGCTTTCAGCCGACAAGGCAGAAGCTTTAGTCACGCAGCTTCGTGAACATCAAGGG
TTAGAAGAAGTAATGGTCAAGCTGACGGACCTCGGGTTTGGACCACAGCTTTCGATGAAGATTTTCCAAGCGTACAAACA
AGAAGCGCTTGAAATTGTGCAAAATAACCCATATCAGCTTGTAGAAGATATTCAAGGTATTGGTTTTAGCCGGGCCGATG
AACTTGGAAAGAGGCTTGGTATGGCAACCAATCATCCTGATCGTTTGCGTGCAGGTATTTTATATGTCATTGAGCAAGAA
TGCAATCAAATGGGACATGTATACGTCACGGCAGATCAGCTGTACGGAAAAACAGCGGAGCTTCTTCGAAAAAGCAGGCA
TGAGAATCTGTCTGAAATGGATCTTACAAGAGAAGTGGACGCGTTAAAAGAAGATAAAAAGCTTATTATTCAAGACGAAA
AAATTTATTTTCCGCCCCTTTTCTATGCTGAAAAAGGGCTGGTTAAAGCTATTCAAAAAATTATGGCTCAAACACAGTAC
GAAGAGCAGTTTCCAGAATCAGAATTTTTATTAGCTCTAGGTGAGCTGGAAGAGCGATTAGACGTACAGTATGCACCGTC
TCAGCGCAAAGGAATACAAACCGCTTTAATGTCTCCAATGCTCCTTTTAACAGGTGGACCAGGCACAGGGAAAACAACGG
TTATTAAAGGAATAGTTGAACTCTATGCAGAGCTTCACGGATGTTCGTTAAATCCAGGTGATTACAAAAAAGATGAAGCT
TTTCCTGTTTTGCTTGTGGCACCTACTGGCCGAGCTGCTAAACGAATGAGCGAAGCGACGGGACTTCCTGCAGTTACCAT
TCACAGATTATTAAAATGGAACGGGCAAGAAGGATTTGATCATAATGAGGAGAATCCGATCGACGGCAAATTACTGATTG
TGGATGAAGTCTCGATGGTAGATTTATGGCTTGCTCATCAGCTGTTTAAATCCCTTCCTGCTAATTTACAGGTTATTCTC
GTTGGAGACGAAGATCAGCTTCCTTCAGTAGGTCCGGGACAGGTGCTAAAAGATTTGCTGAGTTCAGAAGTAGTTCCTAC
CGTCCGCCTGACAGATGTATACAGACAAGCGGAAGGATCGTCAATTATTGATTTGGCTCATGAAATAAAAAAAGGAAAGC
TTCCGGAAGATTTATCTAAACAGCAAGGAGATCGTTCCTTCATTCGTTGTCAAGGACAACACATCACAAACGTCGTTCAG
CAAGTGTGCGGGAATGCGTTAAAAAAAGGGTATACGGCTAAAGATATTCAAGTTCTAGCTCCTATGTATAAAGGTCCTGC
AGGGATTGATAAACTGAATGAAGTTCTTCAGGAATTATTTAACCCGGCTTCTGAGCAAAGAAGAGAGCTTAAGCACGGAG
ATATTACGTACCGAGTCGGAGATAAAGTGCTGCAGCTTGTAAATCAGCCGGATAGCAACGTATTTAACGGAGATATGGGA
GAAATCGTCTCCGTTTTCTTTGCCAAAGAAAATACGGAAAAACAGGATATGCTGGTTATTTCATATGAAGGAAATGAAGT
AACTTACACAAAGCAAGACTTTAATCAAATAACTCATGCATACTGCTGTTCCATTCATAAATCACAGGGAAGTGAATTTC
CCATTGTTGTGCTTCCAATTGTCAAAAGCTATTACCGGATGCTGCGACGCAATTTACTTTATACCGCCGTTACGCGAAGC
AAACAGTTTTTAATTTTATGCGGCGAAGACGAAGCGTTTCAGCTTGGAGTCAGCCGAAATGAAGACAGCGTTCGCCAAAC
GAATTTACAGCCCTTGCTTCGAGAAAGCTTGGATAACGACATAGAAGATCCCGAAATTCCATTTATGAAAGATGCAAATA
TTGGGATGGAAAACGTTACGCCGTATGATTTCATGTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (592-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (344-551)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (679-727)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	64.194	99.618	0.639