Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   L897_RS07280 Genome accession   NC_021807
Coordinates   1454753..1454935 (-) Length   60 a.a.
NCBI ID   WP_011184907.1    Uniprot ID   -
Organism   Streptococcus pyogenes HSC5     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1449753..1459935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L897_RS07265 (L897_07440) - 1450013..1450474 (-) 462 WP_020837633.1 deaminase -
  L897_RS07270 (L897_07445) - 1450509..1451582 (-) 1074 WP_042361523.1 Xaa-Pro peptidase family protein -
  L897_RS07275 (L897_07450) uvrA 1451698..1454526 (-) 2829 WP_002993235.1 excinuclease ABC subunit UvrA Machinery gene
  L897_RS07280 (L897_07455) prx 1454753..1454935 (-) 183 WP_011184907.1 hypothetical protein Regulator
  L897_RS07285 (L897_07460) sda3 1455173..1455973 (+) 801 WP_011285611.1 streptodornase Sda3 -
  L897_RS07290 (L897_07465) - 1456245..1456679 (+) 435 WP_011017966.1 hypothetical protein -
  L897_RS07295 (L897_07470) - 1456729..1457595 (-) 867 WP_011888701.1 DUF334 domain-containing protein -
  L897_RS07300 (L897_07475) - 1457583..1458107 (-) 525 WP_011017840.1 Panacea domain-containing protein -
  L897_RS07305 (L897_07480) - 1458247..1459449 (-) 1203 WP_020837640.1 glucosaminidase domain-containing protein -
  L897_RS07315 (L897_07490) - 1459565..1459792 (-) 228 WP_003058873.1 phage holin -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6976.99 Da        Isoelectric Point: 4.2550

>NTDB_id=49708 L897_RS07280 WP_011184907.1 1454753..1454935(-) (prx) [Streptococcus pyogenes HSC5]
MLTYDEFKQAIDRGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=49708 L897_RS07280 WP_011184907.1 1454753..1454935(-) (prx) [Streptococcus pyogenes HSC5]
ATGCTAACATACGACGAGTTTAAACAAGCGATTGACCGTGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAAAATGGAGAAGTTGTGACCGAGGAGATAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS8232

85

100

0.85
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

88.372

71.667

0.633
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55

Multiple sequence alignment