Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | IF743_RS14075 | Genome accession | NZ_CP062439 |
| Coordinates | 2815800..2816270 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934753.1 | Uniprot ID | A0A1S5YP95 |
| Organism | Staphylococcus aureus strain NAS_AN_285 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2787081..2822014 | 2815800..2816270 | within | 0 |
Gene organization within MGE regions
Location: 2787081..2822014
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF743_RS13885 (IF743_13870) | - | 2787081..2787707 (-) | 627 | WP_000522384.1 | nitroreductase family protein | - |
| IF743_RS13890 (IF743_13875) | - | 2787904..2789079 (+) | 1176 | WP_050962269.1 | SdrH family protein | - |
| IF743_RS13895 (IF743_13880) | mroQ | 2789104..2789847 (-) | 744 | WP_000197635.1 | CPBP family intramembrane glutamic endopeptidase MroQ | - |
| IF743_RS13900 (IF743_13885) | groES | 2790022..2790306 (+) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| IF743_RS13905 (IF743_13890) | groL | 2790382..2791998 (+) | 1617 | WP_000240645.1 | chaperonin GroEL | - |
| IF743_RS13910 (IF743_13895) | - | 2792093..2792639 (-) | 547 | Protein_2703 | site-specific integrase | - |
| IF743_RS13915 (IF743_13900) | - | 2792700..2792912 (+) | 213 | WP_000128898.1 | hypothetical protein | - |
| IF743_RS13920 (IF743_13905) | - | 2792909..2793499 (+) | 591 | WP_240696803.1 | terminase small subunit | - |
| IF743_RS13925 (IF743_13910) | - | 2793817..2794253 (+) | 437 | Protein_2706 | hypothetical protein | - |
| IF743_RS13930 (IF743_13915) | - | 2794359..2794802 (+) | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| IF743_RS13935 (IF743_13920) | - | 2795655..2796962 (-) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| IF743_RS13940 (IF743_13925) | - | 2797123..2798034 (+) | 912 | WP_000825510.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| IF743_RS13945 (IF743_13930) | - | 2798096..2798941 (+) | 846 | WP_000812010.1 | class I SAM-dependent methyltransferase | - |
| IF743_RS13950 (IF743_13935) | - | 2799313..2800536 (-) | 1224 | WP_000206639.1 | ArgE/DapE family deacylase | - |
| IF743_RS13955 (IF743_13940) | lukH | 2800971..2802026 (+) | 1056 | WP_000791407.1 | bi-component leukocidin LukGH subunit H | - |
| IF743_RS13960 (IF743_13945) | lukG | 2802048..2803064 (+) | 1017 | WP_000595324.1 | bi-component leukocidin LukGH subunit G | - |
| IF743_RS13965 (IF743_13950) | sph | 2803302..2804132 (-) | 831 | Protein_2714 | sphingomyelin phosphodiesterase | - |
| IF743_RS13970 (IF743_13955) | - | 2804183..2805220 (-) | 1038 | WP_000857199.1 | site-specific integrase | - |
| IF743_RS13975 (IF743_13960) | - | 2805411..2806124 (-) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| IF743_RS13980 (IF743_13965) | - | 2806202..2806384 (-) | 183 | WP_000705246.1 | hypothetical protein | - |
| IF743_RS13985 (IF743_13970) | - | 2806588..2806929 (-) | 342 | WP_000591749.1 | hypothetical protein | - |
| IF743_RS13990 (IF743_13975) | - | 2806935..2807867 (-) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| IF743_RS13995 (IF743_13980) | - | 2807883..2808596 (-) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| IF743_RS14000 (IF743_13985) | - | 2808559..2808732 (+) | 174 | WP_001801500.1 | hypothetical protein | - |
| IF743_RS14005 (IF743_13990) | - | 2808729..2808992 (+) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| IF743_RS14010 (IF743_13995) | - | 2809008..2809223 (+) | 216 | WP_001025404.1 | MW1434 family type I TA system toxin | - |
| IF743_RS14015 (IF743_14000) | - | 2809212..2809541 (-) | 330 | WP_000180411.1 | hypothetical protein | - |
| IF743_RS14020 (IF743_14005) | - | 2809592..2810344 (+) | 753 | WP_001148642.1 | phage antirepressor KilAC domain-containing protein | - |
| IF743_RS14025 (IF743_14010) | - | 2810360..2810536 (+) | 177 | WP_001001356.1 | hypothetical protein | - |
| IF743_RS14030 (IF743_14015) | - | 2810533..2810763 (-) | 231 | WP_000549548.1 | hypothetical protein | - |
| IF743_RS14035 (IF743_14020) | - | 2810822..2811142 (+) | 321 | WP_001120199.1 | DUF771 domain-containing protein | - |
| IF743_RS14040 (IF743_14025) | - | 2811139..2811300 (+) | 162 | WP_001285960.1 | DUF1270 domain-containing protein | - |
| IF743_RS14045 (IF743_14030) | - | 2811395..2811714 (+) | 320 | Protein_2730 | DUF2482 family protein | - |
| IF743_RS14050 (IF743_14035) | - | 2811695..2811955 (+) | 261 | WP_000291513.1 | DUF1108 family protein | - |
| IF743_RS14055 (IF743_14040) | - | 2811964..2812227 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| IF743_RS14060 (IF743_14045) | - | 2812236..2814179 (+) | 1944 | WP_000700561.1 | AAA family ATPase | - |
| IF743_RS14065 (IF743_14050) | - | 2814181..2815101 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| IF743_RS14070 (IF743_14055) | - | 2815182..2815799 (+) | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| IF743_RS14075 (IF743_14060) | ssbA | 2815800..2816270 (+) | 471 | WP_000934753.1 | single-stranded DNA-binding protein | Machinery gene |
| IF743_RS14080 (IF743_14065) | - | 2816300..2817193 (+) | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| IF743_RS14085 (IF743_14070) | - | 2817200..2817418 (+) | 219 | WP_000338530.1 | hypothetical protein | - |
| IF743_RS14090 (IF743_14075) | - | 2817427..2817831 (+) | 405 | WP_000401977.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IF743_RS14095 (IF743_14080) | - | 2817844..2818212 (+) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| IF743_RS14100 (IF743_14085) | - | 2818216..2818458 (+) | 243 | WP_000131383.1 | phi PVL orf 51-like protein | - |
| IF743_RS14105 (IF743_14090) | - | 2818467..2818838 (+) | 372 | WP_001549172.1 | hypothetical protein | - |
| IF743_RS14110 (IF743_14095) | - | 2818831..2819067 (+) | 237 | WP_001065101.1 | DUF1024 family protein | - |
| IF743_RS14115 (IF743_14100) | - | 2819057..2819299 (+) | 243 | WP_000700108.1 | hypothetical protein | - |
| IF743_RS14120 (IF743_14105) | - | 2819292..2819825 (+) | 534 | WP_000181819.1 | dUTP pyrophosphatase | - |
| IF743_RS14125 (IF743_14110) | - | 2819862..2820107 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| IF743_RS14130 (IF743_14115) | - | 2820104..2820310 (+) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| IF743_RS14135 (IF743_14120) | - | 2820307..2820693 (+) | 387 | WP_000592207.1 | hypothetical protein | - |
| IF743_RS14140 (IF743_14125) | - | 2820690..2820839 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| IF743_RS14145 (IF743_14130) | - | 2820839..2821039 (+) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| IF743_RS14150 (IF743_14135) | - | 2821067..2821483 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
| IF743_RS14155 (IF743_14140) | - | 2821715..2822014 (+) | 300 | WP_000988336.1 | HNH endonuclease | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17668.55 Da Isoelectric Point: 5.2672
>NTDB_id=490180 IF743_RS14075 WP_000934753.1 2815800..2816270(+) (ssbA) [Staphylococcus aureus strain NAS_AN_285]
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=490180 IF743_RS14075 WP_000934753.1 2815800..2816270(+) (ssbA) [Staphylococcus aureus strain NAS_AN_285]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.497 |
100 |
0.641 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.545 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
33.333 |
100 |
0.378 |
| ssb | Neisseria meningitidis MC58 |
33.526 |
100 |
0.372 |
| ssb | Neisseria gonorrhoeae MS11 |
33.526 |
100 |
0.372 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
47.5 |
76.923 |
0.365 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
47.5 |
76.923 |
0.365 |