Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | IF767_RS14365 | Genome accession | NZ_CP062324 |
| Coordinates | 2863221..2863691 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934753.1 | Uniprot ID | A0A1S5YP95 |
| Organism | Staphylococcus aureus strain NAS_OP_063 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2834535..2869435 | 2863221..2863691 | within | 0 |
Gene organization within MGE regions
Location: 2834535..2869435
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF767_RS14175 (IF767_14130) | - | 2834535..2835161 (-) | 627 | WP_000522384.1 | nitroreductase family protein | - |
| IF767_RS14180 (IF767_14135) | - | 2835358..2836500 (+) | 1143 | WP_000120309.1 | SdrH family protein | - |
| IF767_RS14185 (IF767_14140) | mroQ | 2836525..2837268 (-) | 744 | WP_000197635.1 | CPBP family intramembrane glutamic endopeptidase MroQ | - |
| IF767_RS14190 (IF767_14145) | groES | 2837443..2837727 (+) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| IF767_RS14195 (IF767_14150) | groL | 2837803..2839419 (+) | 1617 | WP_000240645.1 | chaperonin GroEL | - |
| IF767_RS14200 (IF767_14155) | - | 2839514..2840060 (-) | 547 | Protein_2759 | site-specific integrase | - |
| IF767_RS14205 (IF767_14160) | - | 2840121..2840333 (+) | 213 | WP_000128898.1 | hypothetical protein | - |
| IF767_RS14210 (IF767_14165) | - | 2840330..2840920 (+) | 591 | WP_001293058.1 | terminase small subunit | - |
| IF767_RS14215 (IF767_14170) | - | 2841238..2841674 (+) | 437 | Protein_2762 | hypothetical protein | - |
| IF767_RS14220 (IF767_14175) | - | 2841780..2842223 (+) | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| IF767_RS14225 (IF767_14180) | - | 2843076..2844383 (-) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| IF767_RS14230 (IF767_14185) | - | 2844544..2845455 (+) | 912 | WP_000825510.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| IF767_RS14235 (IF767_14190) | - | 2845517..2846362 (+) | 846 | WP_000812010.1 | class I SAM-dependent methyltransferase | - |
| IF767_RS14240 (IF767_14195) | - | 2846734..2847957 (-) | 1224 | WP_000206639.1 | ArgE/DapE family deacylase | - |
| IF767_RS14245 (IF767_14200) | lukH | 2848392..2849447 (+) | 1056 | WP_000791407.1 | bi-component leukocidin LukGH subunit H | - |
| IF767_RS14250 (IF767_14205) | lukG | 2849469..2850485 (+) | 1017 | WP_000595324.1 | bi-component leukocidin LukGH subunit G | - |
| IF767_RS14255 (IF767_14210) | sph | 2850723..2851553 (-) | 831 | Protein_2770 | sphingomyelin phosphodiesterase | - |
| IF767_RS14260 (IF767_14215) | - | 2851604..2852641 (-) | 1038 | WP_000857199.1 | site-specific integrase | - |
| IF767_RS14265 (IF767_14220) | - | 2852832..2853545 (-) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| IF767_RS14270 (IF767_14225) | - | 2853623..2853805 (-) | 183 | WP_000705246.1 | hypothetical protein | - |
| IF767_RS14275 (IF767_14230) | - | 2854009..2854350 (-) | 342 | WP_000591749.1 | hypothetical protein | - |
| IF767_RS14280 (IF767_14235) | - | 2854356..2855288 (-) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| IF767_RS14285 (IF767_14240) | - | 2855304..2856017 (-) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| IF767_RS14290 (IF767_14245) | - | 2855980..2856153 (+) | 174 | WP_001801500.1 | hypothetical protein | - |
| IF767_RS14295 (IF767_14250) | - | 2856150..2856413 (+) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| IF767_RS14300 (IF767_14255) | - | 2856429..2856644 (+) | 216 | WP_001025404.1 | MW1434 family type I TA system toxin | - |
| IF767_RS14305 (IF767_14260) | - | 2856633..2856962 (-) | 330 | WP_000180411.1 | hypothetical protein | - |
| IF767_RS14310 (IF767_14265) | - | 2857013..2857765 (+) | 753 | WP_001148642.1 | phage antirepressor KilAC domain-containing protein | - |
| IF767_RS14315 (IF767_14270) | - | 2857781..2857957 (+) | 177 | WP_001001356.1 | hypothetical protein | - |
| IF767_RS14320 (IF767_14275) | - | 2857954..2858184 (-) | 231 | WP_000549548.1 | hypothetical protein | - |
| IF767_RS14325 (IF767_14280) | - | 2858243..2858563 (+) | 321 | WP_001120199.1 | DUF771 domain-containing protein | - |
| IF767_RS14330 (IF767_14285) | - | 2858560..2858721 (+) | 162 | WP_001285960.1 | DUF1270 domain-containing protein | - |
| IF767_RS14335 (IF767_14290) | - | 2858816..2859135 (+) | 320 | Protein_2786 | DUF2482 family protein | - |
| IF767_RS14340 (IF767_14295) | - | 2859116..2859376 (+) | 261 | WP_000291513.1 | DUF1108 family protein | - |
| IF767_RS14345 (IF767_14300) | - | 2859385..2859648 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| IF767_RS14350 (IF767_14305) | - | 2859657..2861600 (+) | 1944 | WP_000700561.1 | AAA family ATPase | - |
| IF767_RS14355 (IF767_14310) | - | 2861602..2862522 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| IF767_RS14360 (IF767_14315) | - | 2862603..2863220 (+) | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| IF767_RS14365 (IF767_14320) | ssbA | 2863221..2863691 (+) | 471 | WP_000934753.1 | single-stranded DNA-binding protein | Machinery gene |
| IF767_RS14370 (IF767_14325) | - | 2863721..2864614 (+) | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| IF767_RS14375 (IF767_14330) | - | 2864621..2864839 (+) | 219 | WP_000338530.1 | hypothetical protein | - |
| IF767_RS14380 (IF767_14335) | - | 2864848..2865252 (+) | 405 | WP_000401977.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IF767_RS14385 (IF767_14340) | - | 2865265..2865633 (+) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| IF767_RS14390 (IF767_14345) | - | 2865637..2865879 (+) | 243 | WP_000131383.1 | phi PVL orf 51-like protein | - |
| IF767_RS14395 (IF767_14350) | - | 2865888..2866259 (+) | 372 | WP_001549172.1 | hypothetical protein | - |
| IF767_RS14400 (IF767_14355) | - | 2866252..2866488 (+) | 237 | WP_001065101.1 | DUF1024 family protein | - |
| IF767_RS14405 (IF767_14360) | - | 2866478..2866720 (+) | 243 | WP_000700108.1 | hypothetical protein | - |
| IF767_RS14410 (IF767_14365) | - | 2866713..2867246 (+) | 534 | WP_000181819.1 | dUTP pyrophosphatase | - |
| IF767_RS14415 (IF767_14370) | - | 2867283..2867528 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| IF767_RS14420 (IF767_14375) | - | 2867525..2867731 (+) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| IF767_RS14425 (IF767_14380) | - | 2867728..2868114 (+) | 387 | WP_000592207.1 | hypothetical protein | - |
| IF767_RS14430 (IF767_14385) | - | 2868111..2868260 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| IF767_RS14435 (IF767_14390) | - | 2868260..2868460 (+) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| IF767_RS14440 (IF767_14395) | - | 2868488..2868904 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
| IF767_RS14445 (IF767_14400) | - | 2869136..2869435 (+) | 300 | WP_000988336.1 | HNH endonuclease | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17668.55 Da Isoelectric Point: 5.2672
>NTDB_id=487765 IF767_RS14365 WP_000934753.1 2863221..2863691(+) (ssbA) [Staphylococcus aureus strain NAS_OP_063]
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=487765 IF767_RS14365 WP_000934753.1 2863221..2863691(+) (ssbA) [Staphylococcus aureus strain NAS_OP_063]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.497 |
100 |
0.641 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.545 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
33.333 |
100 |
0.378 |
| ssb | Neisseria meningitidis MC58 |
33.526 |
100 |
0.372 |
| ssb | Neisseria gonorrhoeae MS11 |
33.526 |
100 |
0.372 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
47.5 |
76.923 |
0.365 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
47.5 |
76.923 |
0.365 |