Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | IC788_RS01570 | Genome accession | NZ_CP061596 |
| Coordinates | 335129..335566 (+) | Length | 145 a.a. |
| NCBI ID | WP_134262483.1 | Uniprot ID | A0A5E9PH15 |
| Organism | Acinetobacter seifertii strain AS59 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 330129..340566
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IC788_RS01550 (IC788_01550) | - | 331521..332408 (+) | 888 | WP_019457867.1 | metal-dependent hydrolase | - |
| IC788_RS01555 (IC788_01555) | - | 332539..333129 (+) | 591 | WP_191001031.1 | LemA family protein | - |
| IC788_RS01560 (IC788_01560) | - | 333151..334233 (+) | 1083 | WP_191001032.1 | TPM domain-containing protein | - |
| IC788_RS01565 (IC788_01565) | - | 334227..334787 (+) | 561 | WP_191001033.1 | TPM domain-containing protein | - |
| IC788_RS01570 (IC788_01570) | pilA | 335129..335566 (+) | 438 | WP_134262483.1 | pilin | Machinery gene |
| IC788_RS01575 (IC788_01575) | - | 335627..336936 (+) | 1310 | Protein_302 | O-antigen ligase family protein | - |
| IC788_RS01580 (IC788_01580) | - | 337047..338675 (+) | 1629 | WP_134262479.1 | PglL family O-oligosaccharyltransferase | - |
| IC788_RS01585 (IC788_01585) | bfr | 338717..339181 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| IC788_RS01590 (IC788_01590) | - | 339426..339620 (-) | 195 | WP_004705220.1 | bacterioferritin-associated ferredoxin | - |
| IC788_RS01595 (IC788_01595) | - | 339828..340211 (-) | 384 | WP_107973480.1 | RidA family protein | - |
Sequence
Protein
Download Length: 145 a.a. Molecular weight: 14788.82 Da Isoelectric Point: 8.1114
>NTDB_id=483426 IC788_RS01570 WP_134262483.1 335129..335566(+) (pilA) [Acinetobacter seifertii strain AS59]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLTDITAGKANTETKLAEGLTANLSAATDVGLQASSNAC
SSISVSVATTGLTTIECTLQGTSQISGKKISWERTADSATAGTTGTWRCKTDVASNLRPKSCGAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLTDITAGKANTETKLAEGLTANLSAATDVGLQASSNAC
SSISVSVATTGLTTIECTLQGTSQISGKKISWERTADSATAGTTGTWRCKTDVASNLRPKSCGAS
Nucleotide
Download Length: 438 bp
>NTDB_id=483426 IC788_RS01570 WP_134262483.1 335129..335566(+) (pilA) [Acinetobacter seifertii strain AS59]
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTCATGATCGTGGTTGCGATTATTGGTATTTTGGCAGCGATCGCAAT
TCCTGCTTATCAAAACTACATTGCTAAATCTCAAGTAAGTACAGGACTAACCGATATTACGGCTGGTAAAGCTAATACTG
AAACTAAATTAGCAGAAGGTTTAACAGCTAATTTATCAGCTGCTACTGATGTAGGCTTGCAAGCTTCAAGTAATGCTTGT
TCTTCAATTAGTGTGTCAGTTGCTACTACTGGATTAACAACAATTGAATGTACATTACAAGGCACTTCACAAATTAGTGG
CAAGAAAATTTCTTGGGAACGAACAGCTGACAGTGCTACAGCAGGGACTACAGGTACATGGCGTTGTAAAACTGATGTAG
CTAGTAATTTACGTCCTAAATCATGTGGCGCATCATAA
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTCATGATCGTGGTTGCGATTATTGGTATTTTGGCAGCGATCGCAAT
TCCTGCTTATCAAAACTACATTGCTAAATCTCAAGTAAGTACAGGACTAACCGATATTACGGCTGGTAAAGCTAATACTG
AAACTAAATTAGCAGAAGGTTTAACAGCTAATTTATCAGCTGCTACTGATGTAGGCTTGCAAGCTTCAAGTAATGCTTGT
TCTTCAATTAGTGTGTCAGTTGCTACTACTGGATTAACAACAATTGAATGTACATTACAAGGCACTTCACAAATTAGTGG
CAAGAAAATTTCTTGGGAACGAACAGCTGACAGTGCTACAGCAGGGACTACAGGTACATGGCGTTGTAAAACTGATGTAG
CTAGTAATTTACGTCCTAAATCATGTGGCGCATCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
48.98 |
100 |
0.497 |
| comP | Acinetobacter baylyi ADP1 |
40.385 |
100 |
0.434 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
43.972 |
97.241 |
0.428 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.958 |
97.931 |
0.421 |
| pilA | Vibrio cholerae strain A1552 |
42.069 |
100 |
0.421 |
| pilA | Vibrio cholerae C6706 |
42.069 |
100 |
0.421 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
42.069 |
100 |
0.421 |
| pilA | Pseudomonas aeruginosa PAK |
38.961 |
100 |
0.414 |