Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   IAQ67_RS10065 Genome accession   NZ_CP061172
Coordinates   2173937..2175205 (+) Length   422 a.a.
NCBI ID   WP_190299127.1    Uniprot ID   A0A7H0YE23
Organism   Paenibacillus peoriae strain ZF390     
Function   facilitate localization of RecA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2168937..2180205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IAQ67_RS10030 (IAQ67_10030) ymfI 2168938..2169705 (+) 768 WP_023988234.1 elongation factor P 5-aminopentanone reductase -
  IAQ67_RS10035 (IAQ67_10035) - 2169808..2170062 (+) 255 WP_013309950.1 DUF3243 domain-containing protein -
  IAQ67_RS10040 (IAQ67_10040) - 2170290..2171063 (+) 774 WP_013370747.1 DUF3388 domain-containing protein -
  IAQ67_RS10045 (IAQ67_10045) - 2171094..2172158 (+) 1065 WP_190299126.1 helix-turn-helix domain-containing protein -
  IAQ67_RS10050 (IAQ67_10050) - 2172243..2172407 (+) 165 WP_023988236.1 hypothetical protein -
  IAQ67_RS10055 (IAQ67_10055) - 2172552..2173043 (+) 492 WP_013309953.1 YajQ family cyclic di-GMP-binding protein -
  IAQ67_RS10060 (IAQ67_10060) pgsA 2173254..2173841 (+) 588 WP_013309954.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  IAQ67_RS10065 (IAQ67_10065) cinA 2173937..2175205 (+) 1269 WP_190299127.1 competence/damage-inducible protein A Machinery gene
  IAQ67_RS10070 (IAQ67_10070) recA 2175448..2176509 (+) 1062 WP_103047842.1 recombinase RecA Machinery gene
  IAQ67_RS10075 (IAQ67_10075) - 2176705..2177454 (+) 750 WP_103047841.1 regulatory protein RecX -
  IAQ67_RS10080 (IAQ67_10080) rny 2177829..2179373 (+) 1545 WP_013309958.1 ribonuclease Y -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46405.43 Da        Isoelectric Point: 4.8341

>NTDB_id=481137 IAQ67_RS10065 WP_190299127.1 2173937..2175205(+) (cinA) [Paenibacillus peoriae strain ZF390]
MKAEIIAVGTELLLGQIVNTNAQYLSQELATIGIDVYFQTVVGDNIDRLQEAIRIAQKRADIILFSGGLGPTQDDLTKEA
IATVLGRKLHIDRLAMDKLDQFFRNRGVEMTENNRRQALSIEGATPLENETGLAVGDAIAQGGKFYVVLPGPPKELKPMF
ANQAKPWLLQQALSGEEMPIYSKMLKFAGIGESALETHLLDLIQSQTDPTIAPYAKEGEVTIRISTKAASESEALIKLTA
TEVEIQQRLSEYMYASEDVALEKVIVDLMAKRELTVSAAESCTGGMLMEHITSIPGSAVMFQGGIVCYSNEMKMKLLNVP
YDYLEGDHAPGAVSKEVALVLAEQARMIMDSDFGLSVTGVAGPGYSERKPVGLVYIGIAERDKETEVHELRLSGNRETIR
LRSVKAILYRLWRRLVENEKLS

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=481137 IAQ67_RS10065 WP_190299127.1 2173937..2175205(+) (cinA) [Paenibacillus peoriae strain ZF390]
ATGAAAGCTGAAATAATTGCAGTAGGAACAGAGTTATTGCTCGGACAAATAGTGAATACAAATGCTCAATATTTGTCACA
AGAGCTGGCTACAATTGGAATCGATGTATATTTTCAGACTGTGGTTGGCGATAACATAGATCGGCTTCAGGAAGCGATAA
GAATTGCTCAGAAGCGTGCGGATATTATTTTGTTTTCCGGCGGTCTGGGGCCGACTCAGGATGATTTGACGAAAGAGGCG
ATAGCGACTGTATTGGGGCGGAAATTGCACATAGATCGTCTTGCAATGGACAAGCTAGATCAATTTTTCCGTAACCGTGG
GGTAGAAATGACCGAGAATAACCGCCGGCAGGCGCTTTCTATTGAAGGTGCTACTCCGCTTGAAAATGAGACAGGGCTAG
CTGTGGGCGACGCGATTGCACAGGGCGGTAAATTTTATGTAGTTTTGCCTGGACCGCCTAAGGAACTCAAACCTATGTTT
GCAAACCAGGCGAAACCTTGGTTGCTTCAGCAGGCATTGAGCGGTGAGGAAATGCCAATTTATTCGAAAATGCTAAAATT
TGCAGGGATCGGTGAGTCAGCTCTTGAAACACATTTGTTAGATCTAATCCAATCCCAGACAGATCCCACGATTGCCCCTT
ATGCCAAGGAAGGGGAAGTCACGATCCGTATATCCACCAAGGCGGCCAGCGAAAGTGAAGCATTAATTAAGCTGACAGCT
ACGGAAGTAGAAATTCAGCAGCGTCTTTCGGAGTATATGTATGCAAGCGAGGATGTTGCGCTGGAGAAGGTTATCGTAGA
TCTAATGGCCAAACGCGAACTCACTGTGAGTGCGGCAGAAAGCTGTACAGGTGGAATGCTGATGGAACACATCACTTCTA
TACCTGGCAGTGCTGTTATGTTTCAAGGTGGCATCGTGTGCTATTCCAATGAAATGAAGATGAAATTACTCAACGTGCCT
TATGATTATTTGGAAGGGGATCATGCGCCGGGTGCAGTGAGTAAGGAAGTAGCCCTTGTGCTTGCGGAGCAGGCGAGAAT
GATCATGGACAGCGATTTTGGACTTTCAGTTACTGGTGTAGCTGGGCCTGGATATTCCGAACGGAAGCCAGTCGGTCTGG
TGTATATTGGCATTGCTGAACGCGACAAGGAAACGGAAGTACATGAGCTGAGACTGAGTGGCAACCGCGAAACAATCCGA
CTGCGATCAGTCAAAGCAATCCTGTACAGATTGTGGCGCAGGCTGGTAGAGAACGAGAAACTCTCTTAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(182-255)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)

Competence-damaged protein (CinA)

(260-414)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H0YE23

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus mitis SK321

49.756

97.156

0.483
  cinA Streptococcus pneumoniae TIGR4

49.512

97.156

0.481
  cinA Streptococcus mitis NCTC 12261

49.268

97.156

0.479
  cinA Streptococcus pneumoniae Rx1

49.268

97.156

0.479
  cinA Streptococcus pneumoniae R6

49.268

97.156

0.479
  cinA Streptococcus pneumoniae D39

49.024

97.156

0.476
  cinA Bacillus subtilis subsp. subtilis str. 168

48.762

95.735

0.467
  cinA Streptococcus mutans UA159

45.176

100

0.455
  cinA Streptococcus suis isolate S10

45.078

91.469

0.412