Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Machinery gene
Locus tag   H7969_RS07945 Genome accession   NZ_CP060280
Coordinates   1584966..1586198 (+) Length   410 a.a.
NCBI ID   WP_002220278.1    Uniprot ID   -
Organism   Neisseria meningitidis strain LNP24198     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1579966..1591198
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7969_RS07925 (H7969_07925) fabI 1580842..1581627 (-) 786 WP_002212340.1 enoyl-ACP reductase FabI -
  H7969_RS07930 (H7969_07930) dapD 1581782..1582603 (-) 822 WP_002220281.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase -
  H7969_RS07935 (H7969_07935) - 1582613..1582843 (-) 231 WP_025458514.1 hypothetical protein -
  H7969_RS07940 (H7969_07940) pgi 1582813..1584456 (-) 1644 WP_002220279.1 glucose-6-phosphate isomerase -
  H7969_RS07945 (H7969_07945) pilG 1584966..1586198 (+) 1233 WP_002220278.1 type 4 pilus assembly protein PilG Machinery gene
  H7969_RS07950 (H7969_07950) pilD 1586272..1587132 (+) 861 WP_002220276.1 A24 family peptidase Machinery gene
  H7969_RS07955 (H7969_07955) coaE 1587134..1587766 (+) 633 WP_002220275.1 dephospho-CoA kinase -
  H7969_RS07960 (H7969_07960) - 1587759..1587968 (+) 210 WP_002212333.1 DNA gyrase inhibitor YacG -
  H7969_RS07965 (H7969_07965) pilF 1588053..1589729 (-) 1677 WP_002220273.1 type IV-A pilus assembly ATPase PilB Machinery gene
  H7969_RS07975 (H7969_07975) - 1590221..1590667 (-) 447 WP_002220271.1 DUF441 domain-containing protein -

Sequence

Protein


Download         Length: 410 a.a.        Molecular weight: 45255.27 Da        Isoelectric Point: 9.9273

>NTDB_id=475213 H7969_RS07945 WP_002220278.1 1584966..1586198(+) (pilG) [Neisseria meningitidis strain LNP24198]
MAKNGGLSLFSKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARKKLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLS
TMIKAGLPLMQAFEIVARGHGNPSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTVMDMSDFFVSYGWMVLIALGFAI
YGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTIARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRV
IQGLSMTSGMRATELFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIGTLLVAMYL
PLFNLGNVVA

Nucleotide


Download         Length: 1233 bp        

>NTDB_id=475213 H7969_RS07945 WP_002220278.1 1584966..1586198(+) (pilG) [Neisseria meningitidis strain LNP24198]
ATGGCTAAAAACGGAGGACTTTCTTTATTTTCAAAGAAAGAAAAACGCTTTATCTTTGAAGGCAGGCATTCCGCCTCCGA
CAAACTGGTCAACGGCGAAGTATCCGCGTTTACCGAAGAAGAGGCGCGCAAAAAACTGGCAAAACGCGGCATCCGCCCGT
TGCAGATTACCCGTGTGAAAACAAGCTCCAAGCGCAAAATCACACAAGAAGACATCACCGTTTTCACCCGCCAGCTGTCC
ACGATGATTAAAGCGGGCCTGCCGCTGATGCAGGCATTTGAAATCGTGGCGCGCGGACACGGCAACCCGTCTATGACGGA
AATGCTGATGGAAATCCGAGGCGAAGTGGAACAGGGCAGCTCGTTGAGCCGCGCATTCTCAAATCACCCGAAATATTTCG
ACCGCTTCTACTGCAACCTGGTTGCGGCGGGCGAAACGGGCGGCGTATTGGAAAGCCTGCTGGACAAATTGGCAATTTAC
AAAGAAAAAACCCAGGCCATCCGCAAAAAGGTAAAAACCGCGCTGACCTATCCGGTATCCGTCATCGCCGTCGCCATCGG
TTTGGTATTCGTGATGATGATTTTCGTACTGCCCGCCTTTAAAGAAGTTTACGCCAATATGGGCGCGGAGCTTCCCGCAC
TGACCCAAACAGTGATGGATATGTCCGACTTTTTCGTCTCATACGGCTGGATGGTGCTGATCGCACTGGGCTTTGCCATA
TACGGCTTCCTTAAATTGAAGGCGCGTTCGATTAAAATCCAACGGCGTATGGATGCCATACTGCTGCGTATGCCGATTTT
CGGAGACATTGTCCGCAAAGGGACGATTGCCCGCTGGGGCAGGACGACGGCGACGCTGATTGCGGCAGGCGTGCCTTTGG
TCGATGTATTGGACTCCACTGCCGGCGCGGCGGGCAATTTAATCTATGAAGAAGCCACCCGGGAAATCCGTACGCGCGTC
ATCCAAGGTTTGTCTATGACTTCGGGGATGCGTGCGACGGAACTGTTCCCCAATATGATGTTGCAGATGTCTTCCATCGG
CGAGGAATCGGGTTCTTTGGACGATATGCTCAACAAAGCCGCCGAATTTTACGAAGACGAGGTGGACAATGCGGTCGGCA
GGCTGTCCGCTATGATGGAGCCGATCATTATCGTGATTTTAGGCTTGGTCATCGGCACGCTTCTGGTCGCCATGTATCTG
CCGCTGTTTAATTTGGGCAACGTGGTCGCCTGA

Domains

Predicted by InterproScan.

Type II secretion system (T2SS), protein F (T2SSF)

(75-198)

Type II secretion system (T2SS), protein F (T2SSF)

(281-401)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

98.78

100

0.988
  pilG Neisseria meningitidis 44/76-A

98.049

100

0.98
  pilC Acinetobacter baumannii D1279779

47.487

97.073

0.461
  pilC Acinetobacter baylyi ADP1

45.614

97.317

0.444
  pilC Pseudomonas stutzeri DSM 10701

44.888

97.805

0.439
  pilC Legionella pneumophila strain ERS1305867

44.836

96.829

0.434
  pilC Vibrio cholerae strain A1552

41.045

98.049

0.402
  pilC Vibrio campbellii strain DS40M4

39.303

98.049

0.385