Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   H7F27_RS11910 Genome accession   NZ_CP060193
Coordinates   2382064..2383314 (-) Length   416 a.a.
NCBI ID   WP_185847962.1    Uniprot ID   A0A7G7U8T3
Organism   Bacillus sp. PAMC26543     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2377064..2388314
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F27_RS11895 (H7F27_11895) rny 2377647..2379209 (-) 1563 WP_010334309.1 ribonuclease Y -
  H7F27_RS11900 (H7F27_11900) - 2379493..2380671 (-) 1179 WP_127695202.1 serine hydrolase -
  H7F27_RS11905 (H7F27_11905) recA 2380845..2381891 (-) 1047 WP_010334307.1 recombinase RecA Machinery gene
  H7F27_RS11910 (H7F27_11910) cinA 2382064..2383314 (-) 1251 WP_185847962.1 competence/damage-inducible protein A Machinery gene
  H7F27_RS11915 (H7F27_11915) pgsA 2383333..2383914 (-) 582 WP_024121454.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  H7F27_RS11920 (H7F27_11920) - 2383964..2384830 (-) 867 WP_229043071.1 RodZ family helix-turn-helix domain-containing protein -
  H7F27_RS11925 (H7F27_11925) - 2384897..2385688 (-) 792 WP_024121452.1 YmfK family protein -
  H7F27_RS11930 (H7F27_11930) - 2385818..2386075 (-) 258 WP_024121451.1 DUF3243 domain-containing protein -
  H7F27_RS11935 (H7F27_11935) ymfI 2386155..2386883 (-) 729 WP_024121450.1 elongation factor P 5-aminopentanone reductase -
  H7F27_RS11940 (H7F27_11940) yfmH 2386935..2388221 (-) 1287 WP_105954257.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence

Protein


Download         Length: 416 a.a.        Molecular weight: 45502.80 Da        Isoelectric Point: 5.0594

>NTDB_id=474513 H7F27_RS11910 WP_185847962.1 2382064..2383314(-) (cinA) [Bacillus sp. PAMC26543]
MEFPKKAEIIAVGSELLLGQIANTNAQFISKQLAEIGVNVFYHTAVGDNPERLKQVIRIAEERSDFIIFSGGLGPTKDDL
TKETIANVLGRPLVLNDEAFQSIEDYFKRTKRTMSPNNRKQALVIEGSDVLANHFGMAPGMLTEHDSRFYMLLPGPPSEL
RPMFENEAKPLLLKKMGSNEKIVSTVLRFFGIGESQLEADLEDIIDAQTNPTIAPLAADGEVTLRLTAKHADEKETERLL
KETEAVILERVGEFFYGYDDTSLVKELSKACKEKGITLSAAESFTGGLFSEWLTDLSGASALFSGGVVCYSNEVKQNVIG
VKKETLDRFGAVSEECASELAKGVQQLTGSDIGISFTGVAGPDTQEGHAPGHVFIGIFANGKEEVHEFHFAGSRTGIRKR
AAKYGCHLILKLLEQK

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=474513 H7F27_RS11910 WP_185847962.1 2382064..2383314(-) (cinA) [Bacillus sp. PAMC26543]
ATGGAATTTCCAAAAAAAGCAGAGATTATTGCAGTCGGTTCAGAGCTCTTACTCGGTCAGATTGCTAATACAAATGCTCA
ATTTATCAGCAAACAGCTGGCAGAAATCGGAGTAAACGTATTTTACCATACAGCAGTCGGTGATAATCCGGAGCGGCTGA
AGCAGGTCATCCGCATTGCTGAAGAGCGCTCTGATTTTATTATTTTTTCAGGAGGGCTCGGGCCGACAAAAGATGATTTA
ACAAAAGAAACAATAGCAAATGTGCTGGGACGTCCGCTCGTTTTAAATGATGAGGCGTTTCAATCCATTGAGGATTATTT
CAAACGAACAAAACGCACGATGTCACCTAATAACCGAAAACAGGCGCTTGTCATCGAAGGATCTGACGTACTGGCGAATC
ACTTTGGAATGGCGCCGGGAATGCTTACAGAGCATGATTCGCGCTTTTATATGCTTCTTCCCGGGCCGCCAAGCGAATTG
CGTCCGATGTTTGAAAATGAGGCAAAACCGCTTCTTCTTAAAAAGATGGGCTCCAATGAAAAAATTGTATCAACTGTTCT
TCGCTTTTTCGGTATCGGCGAATCTCAGCTTGAAGCTGATTTAGAAGATATCATTGATGCACAGACGAACCCGACGATCG
CTCCGTTGGCAGCGGACGGAGAGGTGACGCTTCGCTTGACAGCAAAACATGCCGATGAAAAAGAAACAGAGCGTTTGTTA
AAAGAAACAGAAGCCGTTATTTTAGAACGTGTCGGTGAATTTTTCTATGGCTACGACGATACATCGCTTGTGAAAGAGCT
ATCTAAAGCATGCAAGGAAAAAGGCATCACGCTTTCTGCCGCAGAAAGCTTTACCGGCGGGCTGTTTTCCGAATGGCTGA
CAGACCTTAGCGGCGCTTCAGCATTGTTTTCCGGCGGCGTTGTTTGCTATTCAAACGAAGTGAAGCAAAATGTCATCGGC
GTCAAAAAGGAAACATTGGACCGTTTCGGCGCAGTCAGCGAGGAATGCGCATCTGAGCTCGCAAAGGGTGTTCAGCAGCT
CACTGGAAGCGATATTGGCATTAGCTTTACCGGTGTTGCCGGCCCTGATACTCAAGAAGGCCATGCACCTGGACATGTGT
TTATCGGTATTTTTGCAAACGGAAAAGAAGAGGTTCACGAGTTTCACTTTGCAGGCTCCAGAACAGGAATCAGAAAACGT
GCTGCTAAATATGGCTGCCATTTAATTTTAAAACTGTTAGAGCAAAAATAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(184-257)

Probable molybdopterin binding domain (MoCF_biosynth)

(9-172)

Competence-damaged protein (CinA)

(261-412)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G7U8T3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

95.913

100

0.959
  cinA Streptococcus mitis NCTC 12261

46.411

100

0.466
  cinA Streptococcus mitis SK321

46.411

100

0.466
  cinA Streptococcus pneumoniae TIGR4

46.172

100

0.464
  cinA Streptococcus pneumoniae Rx1

45.933

100

0.462
  cinA Streptococcus pneumoniae R6

45.933

100

0.462
  cinA Streptococcus mutans UA159

46.489

99.279

0.462
  cinA Streptococcus pneumoniae D39

45.694

100

0.459
  cinA Streptococcus suis isolate S10

42.021

90.385

0.38