Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Machinery gene
Locus tag   H3L91_RS00275 Genome accession   NZ_CP059571
Coordinates   48356..49579 (-) Length   407 a.a.
NCBI ID   WP_007341356.1    Uniprot ID   F2B9I7
Organism   Neisseria bacilliformis strain DSM 23338     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 43356..54579
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H3L91_RS00240 (H3L91_00240) hfq 44044..44304 (-) 261 WP_007341349.1 RNA chaperone Hfq -
  H3L91_RS00245 (H3L91_00245) greA 44431..44907 (-) 477 WP_040658481.1 transcription elongation factor GreA -
  H3L91_RS00250 (H3L91_00250) - 45117..45725 (-) 609 WP_007341351.1 HI_0552 family protein -
  H3L91_RS00255 (H3L91_00255) - 45905..46090 (-) 186 WP_007341352.1 DNA gyrase inhibitor YacG -
  H3L91_RS00260 (H3L91_00260) zapD 46094..46855 (-) 762 WP_007341353.1 cell division protein ZapD -
  H3L91_RS00265 (H3L91_00265) coaE 46860..47471 (-) 612 WP_007341354.1 dephospho-CoA kinase -
  H3L91_RS00270 (H3L91_00270) pilD 47468..48349 (-) 882 WP_007341355.1 A24 family peptidase Machinery gene
  H3L91_RS00275 (H3L91_00275) pilG 48356..49579 (-) 1224 WP_007341356.1 type II secretion system F family protein Machinery gene
  H3L91_RS00280 (H3L91_00280) pilF 49598..51271 (-) 1674 WP_007341357.1 type IV-A pilus assembly ATPase PilB Machinery gene
  H3L91_RS00285 (H3L91_00285) - 51420..53009 (-) 1590 WP_040658482.1 inorganic phosphate transporter -
  H3L91_RS00290 (H3L91_00290) - 53530..54402 (-) 873 WP_007341361.1 EamA family transporter -

Sequence

Protein


Download         Length: 407 a.a.        Molecular weight: 44515.49 Da        Isoelectric Point: 10.0438

>NTDB_id=470851 H3L91_RS00275 WP_007341356.1 48356..49579(-) (pilG) [Neisseria bacilliformis strain DSM 23338]
MKTNQANKEKGKRFTFEGKHTQSDQIVRGEVVAANEEDAQRKLLRRGIKPLRITKVKATRKKRITQEDITVFTRQLATMM
KAGLPLMQAFEIVARGHANPSMTQLLMSVKSDVEQGQSMGSAFAKHPKYFDRFYCNLVAAGEAGGVLENLLDKLAVYKEK
TQSIKKKVKSALTYPIAIVVVAVVLVIVMMMFVLPAFGKVYKDMGAELPPLTQFMMTMSDFFVSYGWLVIIGLIGAVVAL
IHLHKTSPKFQKKVDAWTLKLPIFGAIVRKATIARWARTTASLFAAGVPLVEALDSVAGASGNILYEEATLNIKSQVNQG
LSLTSGMQSTGLFPNMVIQMASIGEESGSLDDMLNKAAEFYEEEVDTAVAQLSSLMEPIIMVVLGGIIGTILVAMYLPLF
NLGNVVG

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=470851 H3L91_RS00275 WP_007341356.1 48356..49579(-) (pilG) [Neisseria bacilliformis strain DSM 23338]
ATGAAAACTAACCAAGCAAATAAAGAAAAAGGCAAACGTTTTACCTTTGAAGGCAAGCATACCCAAAGCGATCAGATTGT
GCGCGGCGAGGTGGTTGCGGCCAATGAGGAGGACGCACAGAGAAAGTTGTTGCGCAGAGGCATCAAACCGCTGCGTATCA
CCAAAGTCAAAGCAACCCGTAAAAAGCGGATTACGCAGGAAGACATCACCGTCTTTACCCGCCAGCTGGCCACCATGATG
AAAGCGGGTCTGCCGCTGATGCAGGCTTTTGAAATCGTGGCGCGCGGCCATGCCAATCCGTCAATGACACAGTTGCTGAT
GTCGGTGAAAAGCGATGTGGAGCAAGGTCAGTCTATGGGTTCGGCGTTTGCCAAACATCCCAAATATTTTGACCGTTTTT
ACTGTAACTTGGTAGCAGCCGGCGAAGCGGGTGGTGTGCTGGAAAACCTTTTGGACAAGCTGGCCGTCTATAAGGAAAAA
ACCCAGTCGATCAAGAAAAAGGTGAAATCTGCGCTGACTTATCCTATCGCAATTGTTGTAGTCGCTGTTGTATTAGTCAT
TGTTATGATGATGTTTGTGCTGCCCGCATTCGGTAAAGTTTATAAGGATATGGGCGCAGAATTACCACCCCTTACTCAGT
TTATGATGACCATGTCTGATTTCTTCGTCAGCTACGGCTGGTTGGTGATCATCGGTTTGATTGGCGCAGTAGTGGCGTTA
ATCCATCTCCATAAAACATCACCAAAATTCCAGAAGAAAGTCGATGCTTGGACTTTGAAACTCCCCATCTTTGGCGCGAT
TGTCCGCAAGGCTACCATCGCCCGCTGGGCAAGGACAACGGCCAGTCTGTTTGCTGCCGGCGTGCCTTTGGTGGAGGCTT
TGGATTCTGTCGCCGGGGCATCGGGCAACATCTTGTACGAAGAAGCCACGCTCAATATCAAATCACAAGTCAACCAGGGT
CTTTCGTTGACTTCCGGTATGCAGAGCACAGGTTTGTTCCCCAATATGGTCATTCAGATGGCCTCCATCGGTGAAGAATC
CGGTTCTTTGGATGATATGCTGAATAAAGCGGCGGAATTCTATGAGGAAGAAGTGGATACGGCAGTTGCCCAGCTTTCTT
CGCTGATGGAACCGATCATCATGGTTGTGCTTGGCGGCATCATCGGTACCATATTGGTAGCCATGTACCTGCCGCTGTTC
AACTTGGGCAACGTGGTCGGCTAA

Domains

Predicted by InterproScan.

Type II secretion system (T2SS), protein F (T2SSF)

(276-398)

Type II secretion system (T2SS), protein F (T2SSF)

(72-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F2B9I7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

69.849

97.789

0.683
  pilG Neisseria meningitidis 44/76-A

69.095

97.789

0.676
  pilC Legionella pneumophila strain ERS1305867

47.99

97.789

0.469
  pilC Pseudomonas stutzeri DSM 10701

46.25

98.28

0.455
  pilC Acinetobacter baumannii D1279779

45.729

97.789

0.447
  pilC Acinetobacter baylyi ADP1

45.363

98.034

0.445
  pilC Vibrio cholerae strain A1552

37.5

98.28

0.369
  pilC Vibrio campbellii strain DS40M4

36.453

99.754

0.364