Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   I6I02_RS07280 Genome accession   NZ_CP066093
Coordinates   1607333..1607518 (+) Length   61 a.a.
NCBI ID   WP_037601381.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_1045     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1602333..1612518
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I02_RS07255 (I6I02_07255) - 1602931..1603158 (+) 228 WP_198463362.1 hypothetical protein -
  I6I02_RS11000 - 1603470..1603898 (+) 429 WP_232621254.1 hypothetical protein -
  I6I02_RS11005 - 1603876..1604424 (+) 549 WP_232621255.1 DUF6994 family protein -
  I6I02_RS07265 (I6I02_07265) - 1605821..1606318 (+) 498 WP_045772486.1 NUDIX hydrolase -
  I6I02_RS07270 (I6I02_07270) - 1606315..1606755 (+) 441 WP_021151534.1 ASCH domain-containing protein -
  I6I02_RS07275 (I6I02_07275) - 1607031..1607207 (+) 177 WP_155213607.1 hypothetical protein -
  I6I02_RS07280 (I6I02_07280) prx 1607333..1607518 (+) 186 WP_037601381.1 Paratox Regulator
  I6I02_RS07285 (I6I02_07285) - 1607618..1608982 (-) 1365 WP_070839439.1 sensor histidine kinase -
  I6I02_RS07290 (I6I02_07290) scnR 1608999..1609697 (-) 699 WP_070839547.1 response regulator transcription factor Regulator
  I6I02_RS07295 (I6I02_07295) - 1609955..1610104 (+) 150 WP_037601371.1 lacticin 481 family lantibiotic -
  I6I02_RS07300 (I6I02_07300) - 1610133..1610282 (+) 150 WP_195918055.1 lacticin 481 family lantibiotic -
  I6I02_RS07305 (I6I02_07305) - 1610529..1610687 (+) 159 WP_080702563.1 lacticin 481 family lantibiotic -

Sequence

Protein


Download         Length: 61 a.a.        Molecular weight: 7095.17 Da        Isoelectric Point: 4.2815

>NTDB_id=453790 I6I02_RS07280 WP_037601381.1 1607333..1607518(+) (prx) [Streptococcus salivarius strain FDAARGOS_1045]
MMTYDEVMEAIERGFIKGDKISIIRRNGKIHDYVLPGEKVEPGEIVEKEDLDVVLEELKEF

Nucleotide


Download         Length: 186 bp        

>NTDB_id=453790 I6I02_RS07280 WP_037601381.1 1607333..1607518(+) (prx) [Streptococcus salivarius strain FDAARGOS_1045]
ATGATGACTTATGATGAAGTAATGGAAGCGATAGAAAGAGGGTTTATCAAGGGAGATAAAATCAGCATTATTCGACGAAA
TGGCAAGATCCATGATTATGTTTTACCAGGAGAGAAAGTAGAACCTGGAGAAATAGTGGAAAAAGAGGACTTAGATGTTG
TTCTTGAAGAGTTGAAGGAGTTCTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

54.237

96.721

0.525
  prx Streptococcus pyogenes MGAS8232

54.237

96.721

0.525
  prx Streptococcus pyogenes MGAS315

51.724

95.082

0.492
  prx Streptococcus pyogenes MGAS315

50

95.082

0.475
  prx Streptococcus pyogenes MGAS315

61.905

68.852

0.426
  prx Streptococcus pyogenes MGAS315

60

65.574

0.393
  prx Streptococcus pyogenes MGAS315

53.488

70.492

0.377