Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   IQE12_RS00405 Genome accession   NZ_CP065515
Coordinates   83197..83997 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain GDY8P96A     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 78197..88997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IQE12_RS00390 (IQE12_00390) walK 78866..80692 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  IQE12_RS00395 (IQE12_00395) yycH 80685..82019 (+) 1335 WP_001060150.1 two-component system activity regulator YycH -
  IQE12_RS00400 (IQE12_00400) - 82020..82808 (+) 789 WP_001104167.1 two-component system regulatory protein YycI -
  IQE12_RS00405 (IQE12_00405) vicX 83197..83997 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  IQE12_RS00410 (IQE12_00410) adsA 84225..86543 (+) 2319 WP_181187892.1 LPXTG-anchored adenosine synthase AdsA -
  IQE12_RS00415 (IQE12_00415) rlmH 86911..87390 (+) 480 WP_181187893.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  IQE12_RS00420 (IQE12_00420) - 87983..88372 (+) 390 WP_197668987.1 DUF6339 family protein -
  IQE12_RS00425 (IQE12_00425) - 88428..88745 (+) 318 WP_232091016.1 hypothetical protein -
  IQE12_RS00430 (IQE12_00430) - 88756..88959 (+) 204 WP_209307420.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=449837 IQE12_RS00405 WP_000088649.1 83197..83997(+) (vicX) [Staphylococcus aureus strain GDY8P96A]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=449837 IQE12_RS00405 WP_000088649.1 83197..83997(+) (vicX) [Staphylococcus aureus strain GDY8P96A]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGACCATATTAAAGGTTTAGGTGTTTTAGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAAGCTATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGATATGTGTCGGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGACATGTATCTAATGAGGATGCGGGCCATGCGATGACGGATGTGATTACAGGCAACACGA
AACGTATTTACCTATCACATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474