Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   FOC91_RS18555 Genome accession   NZ_CP053931
Coordinates   3314351..3315589 (+) Length   412 a.a.
NCBI ID   WP_042512276.1    Uniprot ID   -
Organism   Bacillus cereus strain FDAARGOS_797     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 3309351..3320589
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC91_RS18525 (FOC91_18525) - 3309403..3310689 (+) 1287 WP_001994660.1 pitrilysin family protein -
  FOC91_RS18530 (FOC91_18530) - 3310793..3311506 (+) 714 WP_001994686.1 SDR family oxidoreductase -
  FOC91_RS18535 (FOC91_18535) - 3311582..3311830 (+) 249 WP_000114454.1 DUF3243 domain-containing protein -
  FOC91_RS18540 (FOC91_18540) - 3311970..3312755 (+) 786 WP_000574107.1 DUF3388 domain-containing protein -
  FOC91_RS18545 (FOC91_18545) - 3312777..3313688 (+) 912 WP_000137488.1 helix-turn-helix domain-containing protein -
  FOC91_RS18550 (FOC91_18550) pgsA 3313752..3314330 (+) 579 WP_001052973.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  FOC91_RS18555 (FOC91_18555) cinA 3314351..3315589 (+) 1239 WP_042512276.1 competence/damage-inducible protein CinA Machinery gene
  FOC91_RS18560 (FOC91_18560) recA 3315734..3316342 (+) 609 Protein_3377 recombinase RecA -
  FOC91_RS18565 (FOC91_18565) - 3316670..3317092 (+) 423 Protein_3378 DNA recombination/repair protein RecA -
  FOC91_RS18570 (FOC91_18570) rny 3317575..3319137 (+) 1563 WP_000099773.1 ribonuclease Y -
  FOC91_RS18575 (FOC91_18575) - 3319303..3320097 (+) 795 WP_001221095.1 TIGR00282 family metallophosphoesterase -
  FOC91_RS18580 (FOC91_18580) spoVS 3320246..3320506 (+) 261 WP_000404341.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45351.59 Da        Isoelectric Point: 4.8876

>NTDB_id=449132 FOC91_RS18555 WP_042512276.1 3314351..3315589(+) (cinA) [Bacillus cereus strain FDAARGOS_797]
MNAEIIAVGTELLLGQIANTNAQFLSEKLAAIGINVYYHTVVGDNNKRLQQAIEVAEGRADMLIFTGGLGPTKDDLTKET
IASSLAEELVYDEKALASISDYFKRTGREFTENNKKQALVLDGATVFANDHGMAPGMGLNKNGKVYILLPGPPKEMKPMY
VSYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQNVDEAEKLIQHVED
LILERVGEFFYGYDQEFLHDKAIELLKKKGLTLACVESLTGGLFGNQVTESAGVSSVFKGGVICYHNDVKQHVLHVPEEV
LFTDGAVSKECARYLAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIRERSAKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=449132 FOC91_RS18555 WP_042512276.1 3314351..3315589(+) (cinA) [Bacillus cereus strain FDAARGOS_797]
ATGAATGCGGAGATTATTGCGGTTGGAACGGAATTATTACTTGGACAAATTGCAAATACAAATGCCCAGTTTTTATCTGA
AAAGTTAGCTGCAATTGGAATTAACGTGTACTACCATACTGTAGTTGGGGATAATAACAAGCGACTGCAGCAGGCGATTG
AAGTTGCAGAGGGACGTGCGGATATGCTCATTTTCACAGGTGGATTAGGACCGACGAAAGATGATTTAACGAAGGAAACA
ATAGCGTCTAGCTTAGCGGAAGAGCTTGTATATGATGAAAAGGCATTAGCATCAATAAGCGATTACTTTAAGCGAACAGG
TCGAGAGTTCACGGAGAATAATAAAAAGCAGGCGCTCGTTTTGGATGGAGCAACTGTATTTGCAAATGATCACGGTATGG
CACCTGGTATGGGATTAAATAAGAACGGAAAAGTTTATATTTTATTACCAGGACCACCGAAAGAAATGAAGCCAATGTAT
GTAAGTTATGTGGAGCCTTTTTTACGTAACTTTACAACAGGAGAAAACATTTATTCTCGCGTGCTTCGCTTTTTCGGAAT
TGGGGAATCTCAATTAGAGGTGAAAGTTCAAGATTTAATTGATGGACAAACGAATCCGACAATTGCCCCGCTTGCGAATG
ATGGAGAAGTGACATTACGTTTAACTGCTAAACATCAAAATGTTGATGAAGCAGAGAAACTCATTCAGCATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGGTATGACCAAGAGTTTCTGCATGATAAGGCGATAGAGTTATTGAA
GAAAAAAGGATTAACTTTAGCGTGTGTGGAAAGTTTAACAGGTGGTCTCTTCGGTAATCAAGTAACAGAAAGTGCTGGTG
TGTCTTCCGTATTTAAAGGTGGTGTCATTTGTTATCATAATGACGTGAAGCAGCATGTTTTACATGTACCTGAGGAAGTG
TTGTTTACTGACGGTGCAGTTAGTAAAGAATGTGCTCGTTATCTTGCTGAAAATGTTAAAGAATTATTAGAAGCGGATAT
CGGGATTAGTTTCACTGGGGTAGCAGGACCGGATGCTTCAGAACATAAAGAACCGGGAACAGTATTTGTTGGATTGGCGA
TTAAAGATGAACCAACTGTAGTCTTTCCTCTTAATTTAAGTGGAAGTCGCCAACAAATTAGAGAACGCTCAGCGAAATAT
GGATTTTATCATTTATATAAAAAGCTAGAAGAAATATAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Competence-damaged protein (CinA)

(257-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

58.293

99.515

0.58
  cinA Streptococcus mitis SK321

47.017

100

0.478
  cinA Streptococcus pneumoniae TIGR4

46.778

100

0.476
  cinA Streptococcus pneumoniae Rx1

46.301

100

0.471
  cinA Streptococcus pneumoniae R6

46.301

100

0.471
  cinA Streptococcus pneumoniae D39

46.062

100

0.468
  cinA Streptococcus mitis NCTC 12261

46.062

100

0.468
  cinA Streptococcus mutans UA159

45.074

98.544

0.444
  cinA Streptococcus suis isolate S10

41.534

91.748

0.381