Detailed information NTG0441479

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: IPZ77_RS09895
• Genome accession: NZ_CP064057
• Coordinates: 2272779..2273420 (+)
• Length: 213 a.a.
• NCBI ID: WP_200364914.1
• Uniprot ID: -
• Organism: Streptomyces sp. XC 2026
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 2267779..2278420

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IPZ77_RS09870 (IPZ77_09875)	-	2267809..2268276 (+)	468	WP_200364906.1	MarR family transcriptional regulator	-
IPZ77_RS09875 (IPZ77_09880)	-	2268306..2269460 (-)	1155	WP_200364908.1	cystathionine gamma-synthase	-
IPZ77_RS09880 (IPZ77_09885)	-	2269561..2270760 (+)	1200	WP_200364910.1	hypothetical protein	-
IPZ77_RS09885 (IPZ77_09890)	msrA	2270775..2271437 (+)	663	WP_200364912.1	peptide-methionine (S)-S-oxide reductase MsrA	-
IPZ77_RS09890 (IPZ77_09895)	-	2271579..2272496 (-)	918	WP_234389724.1	hypothetical protein	-
IPZ77_RS09895 (IPZ77_09900)	clpP	2272779..2273420 (+)	642	WP_200364914.1	ATP-dependent Clp protease proteolytic subunit	Regulator
IPZ77_RS09900 (IPZ77_09905)	clpP	2273422..2274039 (+)	618	WP_200364916.1	ATP-dependent Clp protease proteolytic subunit	Regulator
IPZ77_RS09905 (IPZ77_09910)	-	2274052..2274399 (-)	348	WP_234389725.1	helix-turn-helix transcriptional regulator	-
IPZ77_RS09910 (IPZ77_09915)	-	2274481..2275743 (-)	1263	WP_234389726.1	Ig-like domain-containing protein	-
IPZ77_RS09915 (IPZ77_09920)	-	2275902..2276231 (-)	330	WP_030728576.1	hypothetical protein	-
IPZ77_RS09920 (IPZ77_09925)	-	2276370..2276549 (+)	180	WP_030728578.1	hypothetical protein	-
IPZ77_RS09925 (IPZ77_09930)	hutH	2276563..2278131 (-)	1569	WP_200368576.1	histidine ammonia-lyase	-

Sequence

Protein

• Length: 213 a.a.
• Molecular weight: 22967.09 Da
• Isoelectric Point: 5.9404

>NTDB_id=441479 IPZ77_RS09895 WP_200364914.1 2272779..2273420(+) (clpP) [Streptomyces sp. XC 2026]
MVPTTALAPPRAREGERAPSAFDDRLAAQLLEQRIVMLGTEVDEGSANRVCAQLLVLAAENPRDDILLYIQSPGGSVHAG
LAIYDTMRLIPNDVATLAVGFAASMGQVLLSVGAAGKRFALPNARIMMHQPSAGIGGTTADIAIQAEHLEHTKRTMERII
AEHTGQSEETIHRDGDRDRWFTAEQAREYGMVDRVVTSLAEVRPAAASRRAGF

Nucleotide

• Length: 642 bp

>NTDB_id=441479 IPZ77_RS09895 WP_200364914.1 2272779..2273420(+) (clpP) [Streptomyces sp. XC 2026]
ATGGTTCCCACCACCGCACTCGCCCCACCACGCGCCCGGGAGGGGGAGCGCGCACCGTCGGCGTTCGACGACCGGCTGGC
CGCGCAGCTGCTGGAGCAGCGGATCGTCATGCTGGGCACCGAGGTCGACGAGGGGTCCGCGAACCGGGTGTGTGCGCAGT
TGCTCGTGCTGGCGGCGGAGAATCCGCGGGACGACATCCTGCTGTACATCCAATCTCCCGGTGGTTCCGTGCACGCGGGG
CTGGCGATCTACGACACCATGCGGCTGATCCCGAACGATGTGGCCACCCTCGCCGTGGGGTTCGCGGCCAGCATGGGGCA
GGTGCTGCTGAGTGTCGGGGCGGCCGGGAAGCGGTTCGCGCTGCCGAACGCGCGGATCATGATGCACCAGCCGTCCGCCG
GGATCGGCGGGACCACCGCCGACATCGCAATCCAGGCGGAGCATCTGGAGCACACCAAGCGGACGATGGAGCGGATCATC
GCCGAGCACACCGGGCAGAGCGAGGAGACGATCCACCGGGACGGGGACCGCGACCGCTGGTTCACCGCCGAACAGGCCAG
GGAGTACGGGATGGTGGACCGGGTGGTGACCTCGCTCGCCGAGGTACGGCCGGCCGCCGCGTCGCGAAGGGCGGGGTTCT
GA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (26-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	46.907	91.08	0.427
clpP	Streptococcus pneumoniae D39	46.907	91.08	0.427
clpP	Streptococcus pneumoniae R6	46.907	91.08	0.427
clpP	Streptococcus pneumoniae TIGR4	46.907	91.08	0.427
clpP	Bacillus subtilis subsp. subtilis str. 168	46.073	89.671	0.413
clpP	Lactococcus lactis subsp. cremoris KW2	45.312	90.141	0.408
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	46.237	87.324	0.404
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	44.792	90.141	0.404
clpP	Streptococcus pyogenes JRS4	44.792	90.141	0.404
clpP	Streptococcus pyogenes MGAS315	44.792	90.141	0.404
clpP	Streptococcus thermophilus LMG 18311	43.814	91.08	0.399
clpP	Streptococcus thermophilus LMD-9	43.814	91.08	0.399
clpP	Streptococcus mutans UA159	43.005	90.61	0.39