Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   HC660_RS04625 Genome accession   NZ_CP051464
Coordinates   916072..916863 (+) Length   263 a.a.
NCBI ID   WP_168747241.1    Uniprot ID   -
Organism   Bacillus mojavensis strain UCMB5075     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 911072..921863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HC660_RS04595 (HC660_08790) - 911918..912949 (+) 1032 WP_010333443.1 iron ABC transporter permease -
  HC660_RS04600 (HC660_08800) - 913062..913940 (+) 879 WP_168747239.1 PhzF family phenazine biosynthesis isomerase -
  HC660_RS04605 (HC660_08810) - 914028..914612 (+) 585 WP_024120644.1 nitroreductase -
  HC660_RS04610 (HC660_08820) - 914651..914842 (-) 192 WP_010333446.1 YfhD family protein -
  HC660_RS04615 (HC660_08830) - 914908..915018 (-) 111 WP_010333447.1 YfhE family protein -
  HC660_RS04620 (HC660_08840) - 915072..915983 (-) 912 WP_168747240.1 TIGR01777 family oxidoreductase -
  HC660_RS04625 (HC660_08850) recX 916072..916863 (+) 792 WP_168747241.1 recombination regulator RecX Regulator
  HC660_RS04630 (HC660_08860) - 916871..917191 (+) 321 WP_010333450.1 YfhH family protein -
  HC660_RS04635 (HC660_08870) - 917329..918522 (+) 1194 WP_168747242.1 MFS transporter -
  HC660_RS04640 (HC660_08880) - 918556..918708 (-) 153 WP_010333452.1 small, acid-soluble spore protein K -
  HC660_RS04645 (HC660_08890) - 918833..919102 (+) 270 WP_024120650.1 YfhJ family protein -
  HC660_RS04650 - 919139..919522 (-) 384 WP_168747243.1 hypothetical protein -
  HC660_RS04655 - 919524..919670 (-) 147 WP_168749399.1 helix-turn-helix domain-containing protein -
  HC660_RS04660 (HC660_08900) - 919798..920316 (+) 519 WP_010333456.1 SH3 domain-containing protein -
  HC660_RS04665 (HC660_08910) - 920402..920734 (+) 333 WP_168747244.1 SdpI family protein -
  HC660_RS04670 (HC660_08920) - 920721..921584 (+) 864 WP_010333458.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 263 a.a.        Molecular weight: 30841.08 Da        Isoelectric Point: 6.5271

>NTDB_id=438459 HC660_RS04625 WP_168747241.1 916072..916863(+) (recX) [Bacillus mojavensis strain UCMB5075]
MPFITKISAQKKNTERFNIFLDEKYAFSVDADVLVKFELKKGKELDDLEIIEIQYGDEVKKGFNRAIEFLSYRMRSTKEV
EDYLKKKETSAPVIAEVIHRLNDYSYLNDQEFAAAYVSTHKKTNGKGPDVLFRELKAKGIDDDTIKDTLGSFSFEEQTEK
AVKHIEKLLKKDKKLSSKEIKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLREEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=438459 HC660_RS04625 WP_168747241.1 916072..916863(+) (recX) [Bacillus mojavensis strain UCMB5075]
ATGCCATTTATTACAAAGATATCAGCGCAAAAGAAAAATACTGAACGTTTTAATATTTTTCTGGATGAAAAATATGCTTT
CAGCGTTGACGCAGATGTGCTCGTGAAATTTGAGCTTAAAAAGGGAAAAGAGCTTGATGACCTCGAGATCATTGAGATTC
AATACGGCGATGAAGTGAAAAAAGGCTTCAACCGTGCGATTGAGTTTTTATCCTATCGAATGAGGTCAACGAAAGAGGTA
GAAGACTACTTAAAGAAAAAAGAAACCTCGGCGCCCGTCATTGCGGAAGTGATTCATAGGCTGAACGATTACAGCTATTT
AAATGACCAAGAGTTTGCGGCGGCCTATGTAAGCACTCACAAAAAAACAAACGGAAAAGGGCCTGACGTTTTGTTCAGAG
AGCTGAAGGCGAAAGGAATCGATGACGATACGATTAAAGATACGCTAGGTTCTTTCTCGTTTGAGGAACAGACGGAAAAA
GCAGTTAAGCATATCGAAAAGCTTCTGAAGAAAGACAAGAAACTCTCTTCAAAAGAAATCAAACAGCGAGCACAGATGCA
GCTGCAGCGCAAAGGCTTTTCATTTGATGTCATCTCTGCGGCGCTGGAGCAGATTGAATACGAAAATGATGAAGACACTG
AAAAAGAAGCGCTGCGTCTTCATGCGGAAAAAGCGTTTAGAAAATACCGTTATGACGGCTCCTATGAAAGTGCCATGAAG
GTCAAACAATTTTTATTTAGAAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCGGGAAGAGGAGTAG

Domains


Predicted by InterproScan.

(84-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

91.255

100

0.913