Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   HC660_RS02170 Genome accession   NZ_CP051464
Coordinates   430747..431697 (+) Length   316 a.a.
NCBI ID   WP_010333025.1    Uniprot ID   -
Organism   Bacillus mojavensis strain UCMB5075     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 425747..436697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HC660_RS02145 (HC660_04190) rapC 427251..428399 (+) 1149 WP_168746930.1 response regulator aspartate phosphatase RapC Regulator
  HC660_RS02150 (HC660_04200) phrC 428383..428505 (+) 123 WP_010333023.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  HC660_RS02155 - 428610..428702 (-) 93 WP_026014660.1 YjcZ family sporulation protein -
  HC660_RS02160 - 428788..428877 (-) 90 Protein_388 sporulation protein YjcZ -
  HC660_RS02165 (HC660_04210) - 428997..430361 (-) 1365 WP_168746931.1 aspartate kinase -
  HC660_RS02170 (HC660_04220) ceuB 430747..431697 (+) 951 WP_010333025.1 petrobactin ABC transporter permease YclN Machinery gene
  HC660_RS02175 (HC660_04230) yclO 431690..432637 (+) 948 WP_024120217.1 petrobactin ABC transporter permease YclO -
  HC660_RS02180 (HC660_04240) yclP 432631..433389 (+) 759 WP_168746932.1 petrobactin ABC transporter ATP-binding protein YclP -
  HC660_RS02185 (HC660_04250) - 433411..434364 (+) 954 WP_168746933.1 siderophore ABC transporter substrate-binding protein -
  HC660_RS02190 (HC660_04260) - 434413..435831 (-) 1419 WP_010333029.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35011.45 Da        Isoelectric Point: 9.8262

>NTDB_id=438457 HC660_RS02170 WP_010333025.1 430747..431697(+) (ceuB) [Bacillus mojavensis strain UCMB5075]
MKLRYLFFLLIILAVTSVFIGVEDLSPLDLFDLSKEEASTLFASRLPRLISILIAGMSMSICGLIMQQITRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLIAFVFALVGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=438457 HC660_RS02170 WP_010333025.1 430747..431697(+) (ceuB) [Bacillus mojavensis strain UCMB5075]
ATGAAGTTACGTTACTTATTTTTTCTACTTATCATACTAGCAGTCACTTCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATCTAAGCAAAGAAGAGGCATCAACGCTCTTTGCCAGCCGTTTGCCGCGGCTGATCAGCATTTTAA
TCGCAGGGATGAGCATGAGCATCTGCGGCCTGATTATGCAGCAGATCACCAGAAACAAATTCGTGTCACCGACGACGGCC
GGCACGATGGACTGGGCGAGGCTGGGAATCTTAATATCCTTGCTTCTGTTTACATCGGCAAGTCCATTAATGAAAATGCT
GATTGCTTTTGTCTTTGCTTTAGTTGGTAATTTTCTGTTTATGAAAATTCTTGAAAGAATTAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGCTCAATCGCGACGTTTATCGCGTATAAATATGACTTGATC
CAAAACGTGTCATCATGGCTTCAGGGGGATTTCTCCTTAGTTGTGAAAGGGAGATACGAGCTTCTCTATCTGAGTATTCC
GCTTGTCATCATTGCCTATGTTTATGCGGATAAATTTACAGTGGCGGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAGCGGGTTGTGAACATCGGGCTCATTATCGTATCCCTGATTACGTCACTTGTCATTTTGACTGTCGGTATG
CTTCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAACCTGAAAAACAGCCTGCCGCACAC
TGCGCTGCTGGGAGCGGTTTTTGTTCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCTTATGAAATCTCGATTG
GTCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

100

0.538