Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   HBA50_RS06655 Genome accession   NZ_CP050133
Coordinates   1331678..1332373 (-) Length   231 a.a.
NCBI ID   WP_045499346.1    Uniprot ID   -
Organism   Streptococcus cristatus ATCC 51100     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1326678..1337373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA50_RS06640 (HBA50_06640) - 1327651..1328121 (-) 471 WP_179856623.1 sigma-70 family RNA polymerase sigma factor -
  HBA50_RS06645 (HBA50_06645) - 1328415..1329350 (-) 936 WP_045499352.1 DUF805 domain-containing protein -
  HBA50_RS06650 (HBA50_06650) comEC/celB 1329457..1331697 (-) 2241 WP_045499349.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  HBA50_RS06655 (HBA50_06655) comEA/celA/cilE 1331678..1332373 (-) 696 WP_045499346.1 helix-hairpin-helix domain-containing protein Machinery gene
  HBA50_RS06660 (HBA50_06660) - 1332523..1333071 (-) 549 WP_045499343.1 HXXEE domain-containing protein -
  HBA50_RS06665 (HBA50_06665) - 1333150..1333890 (-) 741 WP_045499340.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  HBA50_RS06670 (HBA50_06670) - 1334048..1336387 (+) 2340 WP_045499337.1 cation-translocating P-type ATPase -
  HBA50_RS06675 (HBA50_06675) - 1336480..1337226 (+) 747 WP_045499334.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 24639.73 Da        Isoelectric Point: 4.8203

>NTDB_id=430221 HBA50_RS06655 WP_045499346.1 1331678..1332373(-) (comEA/celA/cilE) [Streptococcus cristatus ATCC 51100]
MFEEIVEKLKEYKIFIGLSLIGVVLAGFFLLKGNAQPQNQVSALAQEVVTSASSETNAEKRSANQEKIDSEKDMDPEESE
KEVTVDVKGAVKNPGVYQLQAGARVHDALQKAGGLLPDAESKSINQAQKLTDEAVVYVAKVGEEGADVTQASQTPAGNGE
KAKGKSGLVNLNTATEAELQTVSGIGQKKAQDIIAYREANGKFKSVDELKNVSGIGAKTLEKLKDYVTVDK

Nucleotide


Download         Length: 696 bp        

>NTDB_id=430221 HBA50_RS06655 WP_045499346.1 1331678..1332373(-) (comEA/celA/cilE) [Streptococcus cristatus ATCC 51100]
ATGTTTGAAGAAATAGTTGAAAAATTAAAGGAATACAAGATATTTATTGGACTTTCTTTGATAGGAGTCGTCTTGGCTGG
CTTTTTCTTGCTGAAGGGCAATGCTCAGCCACAGAATCAGGTCAGCGCACTGGCTCAGGAAGTGGTTACATCAGCTTCAT
CTGAAACCAATGCAGAAAAAAGAAGTGCGAATCAAGAAAAAATCGATTCAGAAAAAGATATGGATCCAGAGGAATCTGAG
AAAGAAGTAACAGTTGATGTCAAAGGGGCTGTCAAAAATCCAGGAGTTTATCAGTTGCAGGCAGGAGCGCGTGTGCATGA
TGCCCTACAAAAAGCAGGTGGCCTATTGCCAGATGCCGAGTCAAAATCCATCAACCAAGCACAAAAATTAACAGATGAGG
CAGTTGTCTATGTAGCTAAAGTCGGTGAGGAAGGGGCAGATGTGACGCAAGCTAGTCAGACGCCCGCTGGAAATGGAGAA
AAGGCAAAAGGGAAGTCTGGCTTGGTCAATCTCAATACGGCGACCGAAGCTGAACTTCAGACAGTTTCAGGCATCGGTCA
AAAGAAGGCGCAAGACATCATTGCTTATCGAGAAGCAAATGGTAAATTTAAGTCAGTAGACGAGCTGAAAAATGTTTCAG
GAATCGGTGCAAAAACCTTAGAAAAGTTAAAAGACTATGTCACAGTGGATAAATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(166-228)

SLBB domain (SLBB)

(85-138)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus mitis NCTC 12261

51.528

99.134

0.511
  comEA/celA/cilE Streptococcus mitis SK321

49.782

99.134

0.494
  comEA/celA/cilE Streptococcus pneumoniae Rx1

49.782

99.134

0.494
  comEA/celA/cilE Streptococcus pneumoniae D39

49.782

99.134

0.494
  comEA/celA/cilE Streptococcus pneumoniae R6

49.782

99.134

0.494
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

49.345

99.134

0.489
  comEA Streptococcus thermophilus LMD-9

43.348

100

0.437
  comEA Lactococcus lactis subsp. cremoris KW2

39.13

99.567

0.39