Detailed information NTG0427896

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: G8E00_RS01565
• Genome accession: NZ_CP049801
• Coordinates: 339554..340612 (+)
• Length: 352 a.a.
• NCBI ID: WP_166008720.1
• Uniprot ID: A0A6G8RS87
• Organism: Acinetobacter shaoyimingii strain 323-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 334554..345612

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G8E00_RS01550 (G8E00_01550)	mraY	334805..335923 (+)	1119	WP_166008723.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
G8E00_RS01555 (G8E00_01555)	-	335995..336807 (+)	813	WP_166008722.1	putative RNA methyltransferase	-
G8E00_RS01560 (G8E00_01560)	ponA	336860..339394 (-)	2535	WP_166008721.1	penicillin-binding protein PBP1a	-
G8E00_RS01565 (G8E00_01565)	comM	339554..340612 (+)	1059	WP_166008720.1	pilus assembly protein PilM	Machinery gene
G8E00_RS01570 (G8E00_01570)	pilN	340612..341250 (+)	639	WP_166221533.1	PilN domain-containing protein	Machinery gene
G8E00_RS01575 (G8E00_01575)	pilO	341247..341975 (+)	729	WP_166221535.1	type 4a pilus biogenesis protein PilO	Machinery gene
G8E00_RS01580 (G8E00_01580)	comL	341975..342502 (+)	528	WP_166221537.1	pilus assembly protein PilP	Machinery gene
G8E00_RS01585 (G8E00_01585)	pilQ	342523..344688 (+)	2166	WP_166221539.1	type IV pilus secretin PilQ	Machinery gene
G8E00_RS01590 (G8E00_01590)	aroK	344725..345267 (+)	543	WP_166221541.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38978.56 Da
• Isoelectric Point: 4.4501

>NTDB_id=427896 G8E00_RS01565 WP_166008720.1 339554..340612(+) (comM) [Acinetobacter shaoyimingii strain 323-1]
MLRLYRKPNKGLIGVDISSTSVKILELSVKNGRYWVESYGLSPLVDGSVVEKNILNTEAVAEALERAINIANPQSLNAAF
AIPTSMVIHKIIEMDKDMNDDEREVQIRMEAEQYIPFPLDEVSLDFEVLPDKLSDADRVNVLLVATRTENIDSRVEVIGV
SGLTPKVADVESYALERSFEVFGDTLPIGVNLVGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTQDIQNRYGLSFDE
AGRAKKDQTLPDDYDSEVLLPFLEAVVQQAARSLQFFFSSSQFSELDHILLAGGNANIPGLSKLMQQKLGYRVTIANPFV
QMGFSPQIDLKKLENDAPSLLVACGLAMRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=427896 G8E00_RS01565 WP_166008720.1 339554..340612(+) (comM) [Acinetobacter shaoyimingii strain 323-1]
GTGCTTAGACTATATCGTAAGCCAAATAAGGGGTTAATAGGAGTAGACATTAGTTCGACTTCTGTAAAGATATTAGAGTT
ATCTGTTAAAAACGGTCGCTATTGGGTGGAGAGCTATGGTTTAAGTCCACTCGTTGATGGAAGTGTAGTCGAAAAAAATA
TATTAAATACTGAGGCAGTTGCTGAAGCTTTAGAACGAGCAATCAATATAGCTAACCCACAATCGTTGAATGCGGCATTT
GCTATTCCGACGTCCATGGTTATTCATAAAATAATAGAAATGGACAAAGATATGAATGACGATGAGCGTGAGGTGCAGAT
CCGTATGGAGGCGGAGCAGTATATTCCCTTTCCATTAGATGAAGTCAGCTTAGACTTTGAGGTCTTGCCAGATAAGTTGT
CAGATGCAGATCGTGTCAATGTGCTTTTGGTCGCGACAAGAACAGAAAATATTGACTCTAGGGTAGAAGTGATTGGCGTC
AGTGGCTTAACGCCAAAAGTGGCCGATGTAGAAAGTTATGCTTTAGAGCGTAGTTTCGAAGTGTTTGGAGATACTTTACC
TATTGGTGTCAATCTGGTGGGTATTTTAGACATTGGCCATACCATGACAACCTTGTCAGTCATGCAAAATGGTAAAATTA
TTTATACCCGTGAGCAGGTGTTTGGTGGGAAACAGCTGACGCAAGATATTCAAAATCGATATGGATTATCGTTTGATGAA
GCAGGAAGAGCGAAAAAAGATCAAACATTGCCCGATGATTATGATTCAGAAGTGCTATTACCTTTCCTAGAAGCTGTGGT
TCAACAGGCTGCAAGATCATTACAATTCTTTTTCTCATCTTCGCAGTTTAGTGAGTTAGATCATATTTTGTTGGCAGGGG
GTAATGCAAATATCCCTGGTTTATCCAAACTCATGCAACAAAAGCTAGGTTATCGGGTCACGATTGCAAATCCATTTGTG
CAAATGGGTTTTTCACCTCAAATTGACTTAAAAAAATTAGAAAATGATGCGCCGTCACTGTTGGTAGCATGTGGCTTAGC
AATGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A6G8RS87

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	80.682	100	0.807
pilM	Acinetobacter baumannii D1279779	80.114	100	0.801
comM	Acinetobacter baylyi ADP1	77.273	100	0.773
pilM	Legionella pneumophila strain ERS1305867	41.408	100	0.418