Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   G8O30_RS05255 Genome accession   NZ_CP049742
Coordinates   1037637..1038881 (+) Length   414 a.a.
NCBI ID   WP_239673935.1    Uniprot ID   A0A7S8CAH6
Organism   Mangrovibacillus cuniculi strain R1DC41     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1032637..1043881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8O30_RS05225 (G8O30_05215) yfmH 1032656..1033945 (+) 1290 WP_239673930.1 EF-P 5-aminopentanol modification-associated protein YfmH -
  G8O30_RS05230 (G8O30_05220) ymfI 1034090..1034800 (+) 711 WP_239674495.1 elongation factor P 5-aminopentanone reductase -
  G8O30_RS05235 (G8O30_05225) - 1034871..1035131 (+) 261 WP_239673931.1 DUF3243 domain-containing protein -
  G8O30_RS05240 (G8O30_05230) - 1035305..1036096 (+) 792 WP_239673932.1 YmfK family protein -
  G8O30_RS05245 (G8O30_05235) - 1036115..1037002 (+) 888 WP_239673933.1 helix-turn-helix domain-containing protein -
  G8O30_RS05250 (G8O30_05240) pgsA 1037034..1037621 (+) 588 WP_239673934.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  G8O30_RS05255 (G8O30_05245) cinA 1037637..1038881 (+) 1245 WP_239673935.1 competence/damage-inducible protein A Machinery gene
  G8O30_RS05260 (G8O30_05250) recA 1039292..1040338 (+) 1047 WP_275576525.1 recombinase RecA Machinery gene
  G8O30_RS05265 (G8O30_05255) rny 1040621..1042186 (+) 1566 WP_239673936.1 ribonuclease Y -
  G8O30_RS05270 (G8O30_05260) - 1042405..1043208 (+) 804 WP_239673937.1 TIGR00282 family metallophosphoesterase -
  G8O30_RS05275 (G8O30_05265) - 1043343..1043606 (+) 264 WP_239673938.1 stage V sporulation protein S -

Sequence

Protein


Download         Length: 414 a.a.        Molecular weight: 45410.00 Da        Isoelectric Point: 5.7321

>NTDB_id=427593 G8O30_RS05255 WP_239673935.1 1037637..1038881(+) (cinA) [Mangrovibacillus cuniculi strain R1DC41]
MKAEIIAIGTELLLGQITNSNATYISSQSASAGIFVYHHTAVGDNKDRLEKVIQIAEDRSDLLIFTGGLGPTKDDLTKET
IAKHLGTPLVLDKMALENIKDWFTKMNREMTPNNEKQALILEGSYVLKNDYGMAPGMVYEKAGKTYVLLPGPPNEMKPMV
DNYLIPYLLSKRSDGSVLTSRVLKFYGIGEADLEHQLQDIIDEQSNPTVAPLAGDGEVTLRLTAFGENSSVNKKLLDEME
STIAKRVGAFIYGYDQETLWSSLLNKLRHKNLTLAVAESFTAGLFQSTFAAEAGASSVLKGGVVCYDKSVKTKLLKLDEE
TLESNGVYSEWCARELALSVRRLLNTSIGISFTGVAGPGAHANVDPGTIFMGIAWGEEEVETVKLSLVGSREAIRNRAVK
WMADHLRKKVEQLK

Nucleotide


Download         Length: 1245 bp        

>NTDB_id=427593 G8O30_RS05255 WP_239673935.1 1037637..1038881(+) (cinA) [Mangrovibacillus cuniculi strain R1DC41]
ATGAAGGCCGAGATTATTGCAATCGGTACAGAACTTTTGTTAGGGCAAATTACAAACTCCAACGCTACGTATATTTCCTC
GCAGAGTGCTTCTGCGGGGATTTTTGTCTATCATCATACAGCGGTTGGAGATAATAAAGATCGTTTGGAAAAGGTCATAC
AAATAGCTGAGGATCGTTCTGATCTACTAATTTTCACTGGTGGTTTAGGGCCAACCAAAGATGATCTTACGAAAGAAACG
ATTGCAAAACATTTGGGTACTCCACTTGTTTTAGATAAAATGGCGCTAGAGAATATCAAAGATTGGTTTACCAAAATGAA
TAGAGAAATGACACCTAATAATGAAAAGCAGGCGTTAATCTTAGAAGGTTCCTATGTCTTAAAGAATGATTATGGTATGG
CTCCCGGTATGGTGTATGAGAAAGCTGGGAAAACATATGTACTCTTACCTGGTCCGCCTAATGAGATGAAACCTATGGTT
GATAATTACTTAATTCCTTATCTTTTATCAAAAAGATCAGATGGTAGTGTGCTTACATCTCGAGTATTAAAGTTTTATGG
CATTGGAGAGGCTGATTTAGAGCATCAACTTCAAGATATTATTGATGAACAATCAAATCCTACTGTTGCTCCACTAGCTG
GAGATGGGGAAGTAACACTGCGTCTAACCGCATTTGGTGAAAATAGCAGCGTTAATAAGAAATTATTAGATGAAATGGAA
AGTACCATCGCTAAAAGAGTCGGTGCATTTATCTATGGATATGATCAAGAAACGTTATGGTCTTCATTACTTAACAAGTT
ACGACACAAAAACTTGACCCTTGCAGTTGCTGAAAGTTTCACAGCTGGGTTATTTCAATCTACTTTTGCAGCAGAGGCTG
GTGCAAGTAGTGTTTTAAAAGGAGGGGTAGTTTGTTACGACAAGTCAGTAAAGACCAAACTCTTAAAACTAGATGAAGAA
ACACTTGAGTCAAATGGCGTATATAGCGAATGGTGTGCAAGGGAGTTAGCGTTATCTGTCAGACGATTGCTCAATACTTC
TATTGGTATAAGTTTTACTGGAGTTGCTGGTCCAGGAGCACATGCAAATGTTGATCCAGGGACGATTTTTATGGGAATTG
CTTGGGGTGAAGAAGAAGTAGAGACAGTTAAACTATCTTTAGTAGGTAGCCGTGAAGCAATACGGAATCGAGCAGTAAAG
TGGATGGCAGACCATTTAAGAAAAAAGGTAGAACAACTTAAATAA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)

Competence-damaged protein (CinA)

(258-408)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7S8CAH6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

53.155

99.517

0.529
  cinA Streptococcus pneumoniae TIGR4

46.172

100

0.466
  cinA Streptococcus mitis SK321

45.933

100

0.464
  cinA Streptococcus mitis NCTC 12261

45.694

100

0.461
  cinA Streptococcus pneumoniae Rx1

45.455

100

0.459
  cinA Streptococcus pneumoniae R6

45.455

100

0.459
  cinA Streptococcus pneumoniae D39

45.215

100

0.457
  cinA Streptococcus mutans UA159

44.552

99.758

0.444