Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   M654_RS11435 Genome accession   NZ_CP048273
Coordinates   2215127..2216377 (+) Length   416 a.a.
NCBI ID   WP_026587035.1    Uniprot ID   A0A6I7F8B1
Organism   Bacillus sp. NSP9.1     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2210127..2221377
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M654_RS11410 (M654_011390) - 2211486..2212217 (+) 732 WP_026587030.1 SDR family oxidoreductase -
  M654_RS11415 (M654_011395) - 2212288..2212545 (+) 258 WP_026587031.1 DUF3243 domain-containing protein -
  M654_RS11420 (M654_011400) - 2212759..2213550 (+) 792 WP_026587032.1 YmfK family protein -
  M654_RS11425 (M654_011405) - 2213568..2214464 (+) 897 WP_026587033.1 RodZ family helix-turn-helix domain-containing protein -
  M654_RS11430 (M654_011410) pgsA 2214526..2215107 (+) 582 WP_026587034.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  M654_RS11435 (M654_011415) cinA 2215127..2216377 (+) 1251 WP_026587035.1 competence/damage-inducible protein A Machinery gene
  M654_RS11440 (M654_011420) recA 2216549..2217586 (+) 1038 WP_026587036.1 recombinase RecA Machinery gene
  M654_RS11445 (M654_011425) rny 2217928..2219487 (+) 1560 WP_026587037.1 ribonuclease Y -
  M654_RS11450 (M654_011430) - 2219781..2220578 (+) 798 WP_026587038.1 TIGR00282 family metallophosphoesterase -
  M654_RS11455 (M654_011435) spoVS 2220769..2221029 (+) 261 WP_003181955.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 416 a.a.        Molecular weight: 45497.93 Da        Isoelectric Point: 5.7967

>NTDB_id=420454 M654_RS11435 WP_026587035.1 2215127..2216377(+) (cinA) [Bacillus sp. NSP9.1]
MKLERKAEIIAVGSELLLGQIANTNAQFISKQLAEIGINVFYHTAVGDNPERLKQVIQTAQERSDFIIFSGGLGPTKDDL
TKETIAEVVGRPLGLDEKAFQSIEDYFKKTNRTMSPNNRKQALILKGSDVLPNRFGMAPGMLLEHESRFYMLLPGPPKEL
EPMFEHEAKPLILEKLGSKEKIVSRVLRFFGIGESQLETDLEDLIDAQTNPTIAPLAADGEVTLRLTAKHADPDETSRLL
KETEDRILERVGEFFYGYDDTSLVEELAKACTRKGVTLAAAESFTGGLFSSWLTEISGASEYFKGGAVCYTNELKVSAAG
VSEDTLNRFGAVSAQCAKELAKGIRAKTGSDIGISFTGVAGPNTQEGHPAGKVYIGISQKGKTEEAFEFMFAGSRSGVRK
RSAKYGCHLLLKMLEK

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=420454 M654_RS11435 WP_026587035.1 2215127..2216377(+) (cinA) [Bacillus sp. NSP9.1]
ATGAAATTGGAAAGAAAAGCGGAAATCATCGCTGTCGGATCTGAGCTTCTGCTCGGACAAATCGCCAATACGAACGCGCA
GTTTATCAGCAAACAGCTGGCCGAAATCGGCATTAATGTCTTTTATCACACAGCGGTCGGTGACAACCCCGAGCGTCTCA
AGCAAGTCATTCAAACCGCACAGGAAAGATCTGATTTTATTATTTTCTCAGGCGGGCTTGGACCGACGAAAGACGATTTG
ACAAAAGAAACGATCGCAGAGGTTGTCGGGCGTCCCCTTGGGCTTGATGAGAAGGCCTTTCAATCGATTGAGGATTACTT
TAAAAAAACGAACCGGACGATGTCGCCGAATAATCGCAAACAGGCGCTGATTTTGAAGGGATCGGACGTCCTGCCGAACC
GGTTCGGCATGGCGCCGGGGATGCTTTTGGAGCATGAGTCCCGTTTTTACATGCTTCTTCCCGGTCCGCCGAAAGAGCTT
GAACCGATGTTTGAACATGAAGCGAAGCCGCTGATTTTGGAAAAGCTCGGCTCAAAAGAAAAAATCGTTTCAAGGGTGCT
GCGGTTCTTTGGAATCGGTGAATCCCAGCTTGAAACGGATTTGGAAGATCTCATCGATGCGCAGACAAATCCGACGATCG
CCCCTTTGGCGGCAGACGGGGAAGTCACCCTCCGGCTGACGGCAAAGCATGCCGATCCGGATGAAACAAGCCGTCTGCTG
AAAGAAACGGAAGACCGCATTTTAGAGCGCGTCGGCGAATTCTTTTACGGGTATGATGATACATCGCTCGTGGAAGAGCT
TGCGAAGGCCTGCACCCGAAAAGGGGTGACTCTGGCGGCTGCGGAAAGCTTTACTGGAGGGCTCTTTTCCAGCTGGCTGA
CGGAAATAAGCGGTGCCAGTGAATATTTCAAAGGCGGTGCTGTCTGCTATACGAACGAATTGAAGGTTTCAGCCGCCGGC
GTCTCCGAAGATACGCTGAACCGCTTTGGCGCTGTCAGCGCGCAGTGCGCAAAAGAGCTTGCAAAAGGCATCAGAGCGAA
AACCGGAAGCGATATCGGCATCAGCTTTACGGGAGTGGCCGGACCTAACACCCAGGAAGGCCACCCGGCCGGAAAAGTAT
ATATCGGCATCTCTCAAAAAGGCAAAACAGAAGAGGCCTTTGAATTCATGTTCGCCGGTTCCCGGTCCGGCGTCCGGAAA
CGGTCCGCCAAATACGGCTGCCACCTTTTGCTGAAAATGCTGGAAAAATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(261-414)

Damage-inducible protein CinA KH domain (CinA_KH)

(184-257)

Probable molybdopterin binding domain (MoCF_biosynth)

(9-172)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7F8B1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

78.606

100

0.786
  cinA Streptococcus pneumoniae TIGR4

45.933

100

0.462
  cinA Streptococcus mitis SK321

45.694

100

0.459
  cinA Streptococcus mitis NCTC 12261

45.694

100

0.459
  cinA Streptococcus mutans UA159

46.135

99.519

0.459
  cinA Streptococcus pneumoniae Rx1

45.455

100

0.457
  cinA Streptococcus pneumoniae R6

45.455

100

0.457
  cinA Streptococcus pneumoniae D39

45.215

100

0.454
  cinA Streptococcus suis isolate S10

42.597

92.548

0.394

Multiple sequence alignment