Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | GSF12_RS08010 | Genome accession | NZ_CP047226 |
| Coordinates | 1771693..1772235 (+) | Length | 180 a.a. |
| NCBI ID | WP_159375067.1 | Uniprot ID | A0A6P1KCJ2 |
| Organism | Moraxella osloensis strain YV1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1766693..1777235
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GSF12_RS07995 (GSF12_07995) | pseB | 1767180..1768178 (-) | 999 | WP_159375064.1 | UDP-N-acetylglucosamine 4,6-dehydratase (inverting) | - |
| GSF12_RS08000 (GSF12_08000) | - | 1768218..1769483 (-) | 1266 | WP_159375065.1 | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | - |
| GSF12_RS08005 (GSF12_08005) | - | 1769483..1771282 (-) | 1800 | WP_159375066.1 | PglL family O-oligosaccharyltransferase | - |
| GSF12_RS08010 (GSF12_08010) | pilE | 1771693..1772235 (+) | 543 | WP_159375067.1 | pilin | Machinery gene |
| GSF12_RS08015 (GSF12_08015) | - | 1772320..1773735 (+) | 1416 | WP_159375068.1 | sulfatase-like hydrolase/transferase | - |
| GSF12_RS08020 (GSF12_08020) | - | 1773882..1774298 (-) | 417 | WP_159375069.1 | type IV pilin protein | - |
| GSF12_RS08025 (GSF12_08025) | - | 1774298..1774888 (-) | 591 | WP_159375070.1 | type IV pilin protein | - |
Sequence
Protein
Download Length: 180 a.a. Molecular weight: 17851.47 Da Isoelectric Point: 8.9932
>NTDB_id=411608 GSF12_RS08010 WP_159375067.1 1771693..1772235(+) (pilE) [Moraxella osloensis strain YV1]
MNAQKGFTLIELMIVIAIIGILAAIAIPAYQDYTVRAKVSEVLVAGSSVKSAISEGFQTNGMDGVKSAATSAAKGSTAAP
VSKYLKSIAVSQDGVITLTTTADASLPTEAQGKTIIMAPYARAAGTGSAAGANAALAAGAAGSVEWACSAGTKVQADARL
NGLIATAGTLPAKYAPSECR
MNAQKGFTLIELMIVIAIIGILAAIAIPAYQDYTVRAKVSEVLVAGSSVKSAISEGFQTNGMDGVKSAATSAAKGSTAAP
VSKYLKSIAVSQDGVITLTTTADASLPTEAQGKTIIMAPYARAAGTGSAAGANAALAAGAAGSVEWACSAGTKVQADARL
NGLIATAGTLPAKYAPSECR
Nucleotide
Download Length: 543 bp
>NTDB_id=411608 GSF12_RS08010 WP_159375067.1 1771693..1772235(+) (pilE) [Moraxella osloensis strain YV1]
ATGAACGCTCAAAAAGGTTTTACCCTTATCGAATTGATGATCGTTATCGCTATTATCGGTATTTTGGCTGCGATTGCGAT
TCCTGCTTATCAAGACTATACAGTACGTGCAAAAGTATCTGAGGTACTTGTAGCAGGTTCTTCTGTTAAGTCAGCAATCT
CTGAAGGCTTCCAAACTAATGGGATGGATGGTGTTAAATCAGCAGCAACATCAGCAGCTAAAGGTTCAACAGCAGCGCCA
GTAAGTAAATACTTGAAAAGTATTGCAGTTAGTCAAGATGGTGTAATTACTTTAACGACTACTGCTGATGCAAGTTTACC
AACAGAAGCTCAAGGTAAAACAATTATTATGGCTCCATATGCACGTGCTGCAGGTACAGGCTCTGCGGCAGGTGCTAATG
CTGCATTAGCTGCAGGTGCGGCTGGTTCTGTTGAATGGGCCTGTTCTGCAGGCACTAAAGTACAGGCAGATGCACGTTTG
AATGGTTTGATTGCTACAGCAGGTACTTTACCTGCAAAATATGCGCCTTCTGAGTGCCGTTAA
ATGAACGCTCAAAAAGGTTTTACCCTTATCGAATTGATGATCGTTATCGCTATTATCGGTATTTTGGCTGCGATTGCGAT
TCCTGCTTATCAAGACTATACAGTACGTGCAAAAGTATCTGAGGTACTTGTAGCAGGTTCTTCTGTTAAGTCAGCAATCT
CTGAAGGCTTCCAAACTAATGGGATGGATGGTGTTAAATCAGCAGCAACATCAGCAGCTAAAGGTTCAACAGCAGCGCCA
GTAAGTAAATACTTGAAAAGTATTGCAGTTAGTCAAGATGGTGTAATTACTTTAACGACTACTGCTGATGCAAGTTTACC
AACAGAAGCTCAAGGTAAAACAATTATTATGGCTCCATATGCACGTGCTGCAGGTACAGGCTCTGCGGCAGGTGCTAATG
CTGCATTAGCTGCAGGTGCGGCTGGTTCTGTTGAATGGGCCTGTTCTGCAGGCACTAAAGTACAGGCAGATGCACGTTTG
AATGGTTTGATTGCTACAGCAGGTACTTTACCTGCAAAATATGCGCCTTCTGAGTGCCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
47.423 |
100 |
0.511 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
44.633 |
98.333 |
0.439 |
| pilA2 | Legionella pneumophila str. Paris |
44.068 |
98.333 |
0.433 |
| comP | Acinetobacter baylyi ADP1 |
43.094 |
100 |
0.433 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40.437 |
100 |
0.411 |
| pilE | Neisseria gonorrhoeae MS11 |
37.566 |
100 |
0.394 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
37.912 |
100 |
0.383 |