Detailed information NTG0411410

Bioinformatically predicted

Overview

• Name: vicR
• Type: Regulator
• Locus tag: GQY29_RS07600
• Genome accession: NZ_CP047191
• Coordinates: 1434376..1435083 (+)
• Length: 235 a.a.
• NCBI ID: WP_011681206.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain EU01
• Function: repress comCDE expression; repress comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 1429376..1440083

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GQY29_RS07570 (GQY29_07570)	-	1429657..1429845 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
GQY29_RS07575 (GQY29_07575)	endA	1429907..1430788 (+)	882	WP_111679622.1	DNA/RNA non-specific endonuclease	Machinery gene
GQY29_RS07580 (GQY29_07580)	-	1430859..1431509 (-)	651	WP_100273221.1	amino acid ABC transporter permease	-
GQY29_RS07585 (GQY29_07585)	-	1431521..1432219 (-)	699	WP_014608374.1	amino acid ABC transporter permease	-
GQY29_RS07590 (GQY29_07590)	-	1432237..1433070 (-)	834	WP_011681208.1	transporter substrate-binding domain-containing protein	-
GQY29_RS07595 (GQY29_07595)	-	1433082..1433849 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
GQY29_RS07600 (GQY29_07600)	vicR	1434376..1435083 (+)	708	WP_011681206.1	response regulator YycF	Regulator
GQY29_RS07605 (GQY29_07605)	vicK	1435076..1436416 (+)	1341	WP_084828862.1	cell wall metabolism sensor histidine kinase VicK	Regulator
GQY29_RS07610 (GQY29_07610)	vicX	1436425..1437234 (+)	810	WP_024704147.1	MBL fold metallo-hydrolase	Regulator
GQY29_RS07615 (GQY29_07615)	-	1437294..1437645 (+)	352	Protein_1415	YbaN family protein	-
GQY29_RS07620 (GQY29_07620)	-	1437697..1438911 (-)	1215	WP_084828861.1	aminoacyltransferase	-
GQY29_RS07625 (GQY29_07625)	yidA	1438913..1439722 (-)	810	WP_011226081.1	sugar-phosphatase	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 27058.98 Da
• Isoelectric Point: 5.0130

>NTDB_id=411410 GQY29_RS07600 WP_011681206.1 1434376..1435083(+) (vicR) [Streptococcus thermophilus strain EU01]
MKKILVVDDERPISDIIKFNLTKEGYEVVTAFDGREALEQFEAKKPDLVILDLMLPELDGLEVAKEIRKTSHTPIIMLSA
KDSEFDKVIGLEIGADDYVTKPFSNRELLARIKAHLRRTETIETAVEESSNSGKQEISIGELVIVPDAFVAKKRGNEVEL
THREFELLFHLATHMGQVMTREHLLETVWGYDYFGDVRTVDVTIRRLREKIEDTPSRPEYILTRRGVGYYMKNYD

Nucleotide

• Length: 708 bp

>NTDB_id=411410 GQY29_RS07600 WP_011681206.1 1434376..1435083(+) (vicR) [Streptococcus thermophilus strain EU01]
ATGAAAAAAATTCTAGTTGTTGATGATGAAAGACCAATCTCCGATATCATCAAGTTTAACCTTACTAAGGAGGGTTATGA
AGTGGTTACGGCCTTTGATGGGCGAGAAGCTTTGGAACAATTTGAAGCTAAAAAACCAGACTTGGTTATTCTGGACTTGA
TGTTGCCTGAACTGGATGGTTTGGAAGTTGCCAAGGAAATCCGTAAAACGAGCCACACACCGATTATCATGCTTTCAGCT
AAAGATAGTGAGTTTGATAAGGTTATCGGATTAGAAATTGGGGCAGACGACTATGTGACTAAGCCATTTTCTAACCGTGA
ATTGTTGGCACGTATTAAAGCCCACTTGCGTCGTACAGAAACGATTGAAACCGCAGTAGAAGAGAGCTCTAACTCTGGCA
AACAAGAAATTTCAATTGGTGAGTTGGTTATTGTTCCGGATGCCTTTGTTGCTAAAAAACGTGGAAACGAAGTTGAGTTG
ACCCACCGTGAATTTGAGTTACTCTTCCATTTGGCAACTCATATGGGACAAGTTATGACGCGTGAACATTTGCTTGAAAC
CGTTTGGGGCTATGACTATTTTGGGGATGTTCGTACTGTGGACGTAACGATTCGTCGTCTGCGTGAAAAAATTGAAGATA
CACCTAGCCGTCCTGAATATATCTTGACGCGTCGTGGTGTCGGTTATTACATGAAGAATTATGACTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (4-113)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (155-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
vicR	Streptococcus mutans UA159	85.532	100	0.855
micA	Streptococcus pneumoniae Cp1015	80.258	99.149	0.796
covR	Lactococcus lactis subsp. lactis strain DGCC12653	46.32	98.298	0.455
covR	Streptococcus salivarius strain HSISS4	45.299	99.574	0.451
scnR	Streptococcus mutans UA159	38.559	100	0.387