Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   GQY29_RS07610 Genome accession   NZ_CP047191
Coordinates   1436425..1437234 (+) Length   269 a.a.
NCBI ID   WP_024704147.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain EU01     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1431425..1442234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GQY29_RS07585 (GQY29_07585) - 1431521..1432219 (-) 699 WP_014608374.1 amino acid ABC transporter permease -
  GQY29_RS07590 (GQY29_07590) - 1432237..1433070 (-) 834 WP_011681208.1 transporter substrate-binding domain-containing protein -
  GQY29_RS07595 (GQY29_07595) - 1433082..1433849 (-) 768 WP_011681207.1 amino acid ABC transporter ATP-binding protein -
  GQY29_RS07600 (GQY29_07600) vicR 1434376..1435083 (+) 708 WP_011681206.1 response regulator YycF Regulator
  GQY29_RS07605 (GQY29_07605) vicK 1435076..1436416 (+) 1341 WP_084828862.1 cell wall metabolism sensor histidine kinase VicK Regulator
  GQY29_RS07610 (GQY29_07610) vicX 1436425..1437234 (+) 810 WP_024704147.1 MBL fold metallo-hydrolase Regulator
  GQY29_RS07615 (GQY29_07615) - 1437294..1437645 (+) 352 Protein_1415 YbaN family protein -
  GQY29_RS07620 (GQY29_07620) - 1437697..1438911 (-) 1215 WP_084828861.1 aminoacyltransferase -
  GQY29_RS07625 (GQY29_07625) yidA 1438913..1439722 (-) 810 WP_011226081.1 sugar-phosphatase -
  GQY29_RS07630 (GQY29_07630) - 1439930..1440856 (+) 927 Protein_1418 GNAT family N-acetyltransferase -
  GQY29_RS07635 (GQY29_07635) - 1440914..1441300 (+) 387 WP_159341046.1 DUF1934 domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29943.90 Da        Isoelectric Point: 5.5779

>NTDB_id=411412 GQY29_RS07610 WP_024704147.1 1436425..1437234(+) (vicX) [Streptococcus thermophilus strain EU01]
MSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGMD
IYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMAG
LIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTMEN
QLARADFGVGTDFKIFGTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=411412 GQY29_RS07610 WP_024704147.1 1436425..1437234(+) (vicX) [Streptococcus thermophilus strain EU01]
ATCTCAGAATTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGAAAA
GAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTGATC
TTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATACGGCATGGAT
ATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACATAT
TTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCTATTGATCCAC
AATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCTGGT
CTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCAGGTTCTTATCCTTGGTC
AACCAAGCAACGTATCCTCTCTGATCAGGGTCACTTGTGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCGGTA
ATAAAACTAAAAAGATTTATCTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAAAAT
CAGTTGGCTCGCGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGGTACCTCACCAGATACGGCGACCCCACTAAC
AGATATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.067

100

0.781

Multiple sequence alignment