Detailed information NTG0411409

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: GQY29_RS07575
• Genome accession: NZ_CP047191
• Coordinates: 1429907..1430788 (+)
• Length: 293 a.a.
• NCBI ID: WP_111679622.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain EU01
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1424907..1435788

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GQY29_RS07550 (GQY29_07550)	-	1425282..1426862 (+)	1581	WP_224103295.1	DUF4832 domain-containing protein	-
GQY29_RS07555 (GQY29_07555)	galE	1426877..1427890 (+)	1014	WP_014621668.1	UDP-glucose 4-epimerase GalE	-
GQY29_RS07560 (GQY29_07560)	-	1428078..1428314 (+)	237	WP_002946959.1	DUF1146 family protein	-
GQY29_RS07565 (GQY29_07565)	murA	1428384..1429655 (+)	1272	WP_159341044.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
GQY29_RS07570 (GQY29_07570)	-	1429657..1429845 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
GQY29_RS07575 (GQY29_07575)	endA	1429907..1430788 (+)	882	WP_111679622.1	DNA/RNA non-specific endonuclease	Machinery gene
GQY29_RS07580 (GQY29_07580)	-	1430859..1431509 (-)	651	WP_100273221.1	amino acid ABC transporter permease	-
GQY29_RS07585 (GQY29_07585)	-	1431521..1432219 (-)	699	WP_014608374.1	amino acid ABC transporter permease	-
GQY29_RS07590 (GQY29_07590)	-	1432237..1433070 (-)	834	WP_011681208.1	transporter substrate-binding domain-containing protein	-
GQY29_RS07595 (GQY29_07595)	-	1433082..1433849 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
GQY29_RS07600 (GQY29_07600)	vicR	1434376..1435083 (+)	708	WP_011681206.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31789.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=411409 GQY29_RS07575 WP_111679622.1 1429907..1430788(+) (endA) [Streptococcus thermophilus strain EU01]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLSETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=411409 GQY29_RS07575 WP_111679622.1 1429907..1430788(+) (endA) [Streptococcus thermophilus strain EU01]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTAATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGTCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTTCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGACGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.385	81.57	0.59
endA	Streptococcus pneumoniae D39	72.385	81.57	0.59
endA	Streptococcus pneumoniae R6	72.385	81.57	0.59
endA	Streptococcus pneumoniae TIGR4	72.385	81.57	0.59