Detailed information
Bioinformatically predicted
Overview
| Name | cinA | Type | Machinery gene |
| Locus tag | GQR93_RS06840 | Genome accession | NZ_CP047121 |
| Coordinates | 1471813..1472289 (+) | Length | 158 a.a. |
| NCBI ID | WP_003553661.1 | Uniprot ID | C0XLC4 |
| Organism | Lentilactobacillus hilgardii strain FLUB | ||
| Function | facilitate localization of RecA (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1466813..1477289
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQR93_RS06820 (GQR93_06820) | yfmF | 1467238..1468518 (+) | 1281 | WP_003553652.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| GQR93_RS06825 (GQR93_06825) | yfmH | 1468502..1469785 (+) | 1284 | WP_003553654.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| GQR93_RS06830 (GQR93_06830) | - | 1469870..1470952 (+) | 1083 | WP_003553656.1 | RodZ family helix-turn-helix domain-containing protein | - |
| GQR93_RS06835 (GQR93_06835) | pgsA | 1470977..1471558 (+) | 582 | WP_003553659.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| GQR93_RS06840 (GQR93_06840) | cinA | 1471813..1472289 (+) | 477 | WP_003553661.1 | CinA family protein | Machinery gene |
| GQR93_RS06845 (GQR93_06845) | recA | 1472386..1473528 (+) | 1143 | WP_159298728.1 | recombinase RecA | Machinery gene |
| GQR93_RS06850 (GQR93_06850) | rny | 1473834..1475417 (+) | 1584 | WP_202212595.1 | ribonuclease Y | - |
| GQR93_RS06855 (GQR93_06855) | - | 1475506..1476306 (+) | 801 | WP_003553669.1 | TIGR00282 family metallophosphoesterase | - |
Sequence
Protein
Download Length: 158 a.a. Molecular weight: 16992.50 Da Isoelectric Point: 5.6770
>NTDB_id=410784 GQR93_RS06840 WP_003553661.1 1471813..1472289(+) (cinA) [Lentilactobacillus hilgardii strain FLUB]
MSLEQKLVEQLLKKHITITAAESLTAGLFQSTLGNVSGVSKVFEGGFVTYSDKVKEQLLHVPHDVIAENSVVSEPTAIWM
ADQARRIMDKDLAVSFTGVAGPDALEGNPVGTVWIGIAFGAQISYAKKFQFEGLRNQIREAAVEAGLKMALSAITSDK
MSLEQKLVEQLLKKHITITAAESLTAGLFQSTLGNVSGVSKVFEGGFVTYSDKVKEQLLHVPHDVIAENSVVSEPTAIWM
ADQARRIMDKDLAVSFTGVAGPDALEGNPVGTVWIGIAFGAQISYAKKFQFEGLRNQIREAAVEAGLKMALSAITSDK
Nucleotide
Download Length: 477 bp
>NTDB_id=410784 GQR93_RS06840 WP_003553661.1 1471813..1472289(+) (cinA) [Lentilactobacillus hilgardii strain FLUB]
TTGTCACTTGAACAAAAACTGGTTGAGCAATTATTGAAGAAGCATATTACAATTACTGCTGCAGAAAGTCTAACTGCTGG
GCTGTTTCAGAGCACATTGGGGAATGTCTCCGGTGTTTCAAAGGTTTTTGAAGGGGGATTTGTCACGTATTCTGATAAAG
TTAAGGAACAGTTGCTACATGTTCCTCACGATGTTATTGCTGAAAACAGTGTTGTCAGTGAACCGACGGCTATCTGGATG
GCAGATCAAGCAAGACGAATCATGGATAAAGACTTAGCGGTTTCCTTCACGGGGGTTGCCGGTCCAGATGCCTTGGAAGG
TAATCCTGTCGGAACGGTTTGGATCGGAATTGCGTTTGGGGCACAAATTAGTTATGCTAAAAAGTTCCAGTTTGAAGGAT
TACGTAATCAAATTCGTGAAGCTGCCGTTGAGGCTGGATTAAAAATGGCATTATCCGCTATTACGAGTGACAAATAA
TTGTCACTTGAACAAAAACTGGTTGAGCAATTATTGAAGAAGCATATTACAATTACTGCTGCAGAAAGTCTAACTGCTGG
GCTGTTTCAGAGCACATTGGGGAATGTCTCCGGTGTTTCAAAGGTTTTTGAAGGGGGATTTGTCACGTATTCTGATAAAG
TTAAGGAACAGTTGCTACATGTTCCTCACGATGTTATTGCTGAAAACAGTGTTGTCAGTGAACCGACGGCTATCTGGATG
GCAGATCAAGCAAGACGAATCATGGATAAAGACTTAGCGGTTTCCTTCACGGGGGTTGCCGGTCCAGATGCCTTGGAAGG
TAATCCTGTCGGAACGGTTTGGATCGGAATTGCGTTTGGGGCACAAATTAGTTATGCTAAAAAGTTCCAGTTTGAAGGAT
TACGTAATCAAATTCGTGAAGCTGCCGTTGAGGCTGGATTAAAAATGGCATTATCCGCTATTACGAGTGACAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cinA | Streptococcus pneumoniae Rx1 |
49.682 |
99.367 |
0.494 |
| cinA | Streptococcus pneumoniae R6 |
49.682 |
99.367 |
0.494 |
| cinA | Streptococcus pneumoniae D39 |
49.682 |
99.367 |
0.494 |
| cinA | Streptococcus pneumoniae TIGR4 |
49.045 |
99.367 |
0.487 |
| cinA | Streptococcus mitis NCTC 12261 |
46.497 |
99.367 |
0.462 |
| cinA | Streptococcus mitis SK321 |
56.41 |
74.051 |
0.418 |
| cinA | Streptococcus mutans UA159 |
51.282 |
74.051 |
0.38 |
| cinA | Bacillus subtilis subsp. subtilis str. 168 |
39.333 |
94.937 |
0.373 |