Detailed information NTG0404988

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: GOM47_RS04480
• Genome accession: NZ_CP046524
• Coordinates: 864412..865260 (+)
• Length: 282 a.a.
• NCBI ID: WP_235081185.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain SOT
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 859412..870260

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOM47_RS04460 (GOM47_04460)	-	859508..859939 (+)	432	WP_235081181.1	arginine repressor	-
GOM47_RS04465 (GOM47_04465)	recN	859946..861613 (+)	1668	WP_235081182.1	DNA repair protein RecN	-
GOM47_RS04470 (GOM47_04470)	-	861614..862342 (+)	729	WP_235081183.1	metallophosphoesterase family protein	-
GOM47_RS04475 (GOM47_04475)	lepA	862421..864244 (+)	1824	WP_235081184.1	translation elongation factor 4	-
GOM47_RS04480 (GOM47_04480)	dprA/cilB/dalA	864412..865260 (+)	849	WP_235081185.1	DNA-processing protein DprA	Machinery gene
GOM47_RS04485 (GOM47_04485)	topA	865378..867465 (+)	2088	WP_235081186.1	type I DNA topoisomerase	-
GOM47_RS04490 (GOM47_04490)	-	867572..867931 (+)	360	WP_001220359.1	YbaN family protein	-
GOM47_RS04495 (GOM47_04495)	-	868025..868657 (+)	633	WP_235081187.1	copper homeostasis protein CutC	-
GOM47_RS04500 (GOM47_04500)	-	868701..869357 (+)	657	WP_235081188.1	MmcQ/YjbR family DNA-binding protein	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 31330.83 Da
• Isoelectric Point: 5.6131

>NTDB_id=404988 GOM47_RS04480 WP_235081185.1 864412..865260(+) (dprA/cilB/dalA) [Streptococcus oralis strain SOT]
MKITNYEIYKLRKAGLTNQQILTVLEYDETVDQELLLGDIAEISRFRNPAVFMERYFQIDDAQLEKEFQKFPSFSILDDC
YPWDLSEIYDAPALLFYKGNLDLLKFPKVAVVGSRSCSSQGAKSVQRVIQGLGNELIVVSGLAKGIDTAAHMAALQNGGR
TIAVIGTGLDVFYPRANKRLQEHIGNHHLVLSEYGPGEEPLKFHFPARNRIIAGLCRGVIVAEARMRSGSLITCERAMEE
GRDVFAIPGNILDGHSDGCHHLIQEGAKLVTSGQDVLAEFEF

Nucleotide

• Length: 849 bp

>NTDB_id=404988 GOM47_RS04480 WP_235081185.1 864412..865260(+) (dprA/cilB/dalA) [Streptococcus oralis strain SOT]
ATGAAGATTACAAACTATGAGATTTACAAATTGAGAAAAGCTGGGCTGACCAATCAACAAATTTTAACTGTTCTTGAATA
TGACGAGACTGTAGATCAGGAGCTCTTGCTAGGTGATATTGCGGAAATATCTAGGTTCCGTAATCCAGCGGTTTTTATGG
AACGCTATTTCCAGATAGATGATGCGCAGTTGGAGAAGGAGTTTCAGAAATTTCCATCCTTTTCTATTCTTGACGACTGT
TATCCTTGGGATCTGAGTGAGATTTATGATGCTCCAGCGCTTTTGTTTTATAAGGGAAATCTAGACTTATTGAAATTTCC
AAAGGTTGCTGTTGTAGGGAGCCGTTCATGTTCTAGTCAGGGTGCAAAGTCGGTTCAGAGAGTCATCCAAGGTCTGGGAA
ACGAGTTGATCGTGGTCAGTGGCTTGGCTAAAGGAATTGATACAGCCGCCCATATGGCTGCACTCCAGAATGGAGGAAGA
ACAATTGCTGTCATTGGAACAGGATTGGATGTTTTTTATCCCCGAGCCAATAAACGTTTGCAGGAACACATTGGCAATCA
CCATTTGGTACTTAGCGAGTACGGACCTGGTGAAGAACCCTTGAAATTTCACTTTCCAGCTCGTAATCGAATCATAGCAG
GACTATGTCGAGGGGTCATTGTAGCAGAGGCAAGAATGCGTTCAGGGAGTCTCATTACCTGTGAGCGTGCTATGGAGGAA
GGGCGTGATGTCTTTGCCATTCCAGGGAACATTTTAGATGGCCATTCAGATGGCTGTCATCACCTAATCCAAGAGGGAGC
AAAACTGGTCACCAGCGGTCAAGATGTGTTGGCTGAGTTTGAATTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (3-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	90.78	100	0.908
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	90.426	100	0.904
dprA/cilB/dalA	Streptococcus pneumoniae D39	90.426	100	0.904
dprA/cilB/dalA	Streptococcus pneumoniae R6	90.426	100	0.904
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	90.426	100	0.904
dprA/cilB/dalA	Streptococcus mitis SK321	89.716	100	0.897
dprA	Streptococcus mutans UA159	60.357	99.291	0.599
dprA	Lactococcus lactis subsp. cremoris KW2	54.643	99.291	0.543
dprA	Acinetobacter baylyi ADP1	39.544	93.262	0.369
dprA	Haemophilus influenzae Rd KW20	38.577	94.681	0.365
dprA	Glaesserella parasuis strain SC1401	40.157	90.071	0.362