Detailed information NTG0403197

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: GL185_RS08560
• Genome accession: NZ_CP046357
• Coordinates: 1708514..1708918 (+)
• Length: 134 a.a.
• NCBI ID: WP_000588030.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 525
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1703514..1713918

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GL185_RS08535 (GL185_08685)	-	1704639..1705697 (+)	1059	WP_000649471.1	zinc-dependent alcohol dehydrogenase family protein	-
GL185_RS08540 (GL185_08690)	-	1705848..1706213 (+)	366	WP_000286415.1	DUF1033 family protein	-
GL185_RS08545 (GL185_08695)	comGA/cglA/cilD	1706288..1707229 (+)	942	WP_000249555.1	competence type IV pilus ATPase ComGA	Machinery gene
GL185_RS08550 (GL185_08700)	comGB/cglB	1707177..1708193 (+)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
GL185_RS08555 (GL185_08705)	comGC/cglC	1708195..1708521 (+)	327	WP_000738625.1	competence type IV pilus major pilin ComGC	Machinery gene
GL185_RS08560 (GL185_08710)	comGD/cglD	1708514..1708918 (+)	405	WP_000588030.1	competence type IV pilus minor pilin ComGD	Machinery gene
GL185_RS08565 (GL185_08715)	comGE/cglE	1708881..1709183 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
GL185_RS08570 (GL185_08720)	comGF/cglF	1709146..1709607 (+)	462	WP_000250539.1	competence type IV pilus minor pilin ComGF	Machinery gene
GL185_RS08575 (GL185_08725)	comGG/cglG	1709585..1710031 (+)	447	WP_001811371.1	competence type IV pilus minor pilin ComGG	Machinery gene
GL185_RS08580 (GL185_08730)	-	1710134..1710721 (+)	588	WP_000679779.1	class I SAM-dependent methyltransferase	-
GL185_RS08585 (GL185_08735)	comYH	1710782..1711735 (+)	954	WP_000345122.1	class I SAM-dependent methyltransferase	Machinery gene
GL185_RS08590 (GL185_08740)	-	1711786..1712976 (+)	1191	WP_000167765.1	acetate kinase	-
GL185_RS11460	-	1712977..1713108 (+)	132	WP_000768904.1	hypothetical protein	-
GL185_RS08595 (GL185_08745)	rnpA	1713125..1713496 (+)	372	WP_000739247.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14668.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=403197 GL185_RS08560 WP_000588030.1 1708514..1708918(+) (comGD/cglD) [Streptococcus pneumoniae strain 525]
MIKAFTMLESLLVLGLVSILALGLSSSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=403197 GL185_RS08560 WP_000588030.1 1708514..1708918(+) (comGD/cglD) [Streptococcus pneumoniae strain 525]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTATCCAGCTC
TGTCCAGTCCACTTTTGCAGCAGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	48.438	95.522	0.463
comYD	Streptococcus mutans UA159	48.438	95.522	0.463