Detailed information NTG0400620

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: GJD93_RS02485
• Genome accession: NZ_CP046045
• Coordinates: 300948..302006 (+)
• Length: 352 a.a.
• NCBI ID: WP_004974460.1
• Uniprot ID: -
• Organism: Acinetobacter towneri strain 19110F47
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 295948..307006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJD93_RS02470 (GJD93_02470)	mraY	296127..297245 (+)	1119	WP_004974448.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
GJD93_RS02475 (GJD93_02475)	-	297317..298120 (+)	804	WP_104852655.1	putative RNA methyltransferase	-
GJD93_RS02480 (GJD93_02480)	ponA	298226..300778 (-)	2553	WP_154320247.1	penicillin-binding protein PBP1a	-
GJD93_RS02485 (GJD93_02485)	pilM	300948..302006 (+)	1059	WP_004974460.1	pilus assembly protein PilM	Machinery gene
GJD93_RS02490 (GJD93_02490)	pilN	302006..302641 (+)	636	WP_004974461.1	PilN domain-containing protein	Machinery gene
GJD93_RS02495 (GJD93_02495)	comO	302638..303408 (+)	771	WP_154320248.1	type 4a pilus biogenesis protein PilO	Machinery gene
GJD93_RS02500 (GJD93_02500)	pilP	303405..303929 (+)	525	WP_104852650.1	pilus assembly protein PilP	Machinery gene
GJD93_RS02505 (GJD93_02505)	pilQ	303990..306140 (+)	2151	WP_171501118.1	type IV pilus secretin PilQ	Machinery gene
GJD93_RS02510 (GJD93_02510)	aroK	306178..306720 (+)	543	WP_004974468.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38960.60 Da
• Isoelectric Point: 4.5838

>NTDB_id=400620 GJD93_RS02485 WP_004974460.1 300948..302006(+) (pilM) [Acinetobacter towneri strain 19110F47]
MRRLYRKPSKGLIGVDISSTSVKLLELSVKNGRYWVESYALVPLPEGSVVEKNILNPEAVGDALERALNLANTQSTSAAL
AIPTSMVITKIIEMDADMTSDEREVQIRMDAEQYIPFPLDEVSLDFEVQPDRLANPNRVNVLLVATRLENVEARVEALEL
GGLTAKIADVESFAIENAFKVFSDTLPMGVNTIGILDIGHTMTTLSVLQNNKIIYTREQTFGGKQLTQEIQNRYGLSYEE
AGRAKKSRTLPDDYDVEVLEPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKRIESDAPSLMVACGLAMRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=400620 GJD93_RS02485 WP_004974460.1 300948..302006(+) (pilM) [Acinetobacter towneri strain 19110F47]
GTGCGTAGGTTATATCGTAAGCCAAGTAAGGGGTTAATAGGTGTAGATATTAGTTCTACTTCTGTTAAGTTATTAGAACT
CTCTGTTAAGAATGGTAGATACTGGGTCGAGAGCTATGCGCTGGTCCCACTTCCAGAAGGCAGTGTGGTTGAAAAAAACA
TTCTCAATCCAGAAGCAGTCGGGGATGCGCTTGAACGTGCATTGAACTTAGCAAACACGCAATCTACATCTGCAGCATTA
GCAATTCCAACCTCAATGGTGATTACCAAAATCATTGAAATGGATGCAGATATGACTAGCGATGAGCGTGAAGTTCAAAT
TCGTATGGACGCCGAGCAATATATTCCATTCCCATTAGATGAAGTCAGCCTAGACTTTGAAGTCCAACCAGACCGTTTAG
CCAATCCAAACCGAGTCAATGTGTTACTGGTTGCAACACGTTTAGAAAACGTAGAAGCACGAGTAGAAGCATTGGAGTTG
GGCGGCTTGACAGCCAAAATTGCCGATGTCGAAAGTTTTGCCATCGAAAATGCCTTTAAAGTGTTCTCCGATACCCTGCC
AATGGGTGTGAACACCATTGGTATTTTGGATATTGGTCATACCATGACCACCTTGTCGGTACTGCAAAATAACAAAATTA
TTTATACCCGCGAGCAAACCTTTGGCGGTAAGCAGCTGACACAAGAAATTCAAAACCGTTATGGTTTGTCGTATGAAGAA
GCAGGGCGTGCGAAAAAAAGCCGTACTTTGCCAGATGACTACGATGTAGAAGTGCTCGAACCGTTCTTAGAAGCGGTGGT
GCAACAAGCTGCACGTTCATTGCAGTTCTTTTTCTCATCTTCACAATTTAACGAAATTGATCACATTTTATTGGCAGGGG
GGAATGCCAATATTCCAGGTCTTGCGAAGTTGTTGCAGCAAAAACTGGGCTACCGTGTGACCATTGCCAATCCATTCTTA
CAAATGGGCTTCTCTCCACAAATCGACATTAAAAGAATTGAAAGTGATGCGCCGTCATTGATGGTGGCATGTGGTTTAGC
AATGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	84.091	100	0.841
comM	Acinetobacter nosocomialis M2	84.091	100	0.841
comM	Acinetobacter baylyi ADP1	78.977	100	0.79
pilM	Legionella pneumophila strain ERS1305867	39.831	100	0.401