Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | GJD93_RS02490 | Genome accession | NZ_CP046045 |
| Coordinates | 302006..302641 (+) | Length | 211 a.a. |
| NCBI ID | WP_004974461.1 | Uniprot ID | A0AAP4M279 |
| Organism | Acinetobacter towneri strain 19110F47 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 297006..307641
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJD93_RS02475 (GJD93_02475) | - | 297317..298120 (+) | 804 | WP_104852655.1 | putative RNA methyltransferase | - |
| GJD93_RS02480 (GJD93_02480) | ponA | 298226..300778 (-) | 2553 | WP_154320247.1 | penicillin-binding protein PBP1a | - |
| GJD93_RS02485 (GJD93_02485) | pilM | 300948..302006 (+) | 1059 | WP_004974460.1 | pilus assembly protein PilM | Machinery gene |
| GJD93_RS02490 (GJD93_02490) | pilN | 302006..302641 (+) | 636 | WP_004974461.1 | PilN domain-containing protein | Machinery gene |
| GJD93_RS02495 (GJD93_02495) | comO | 302638..303408 (+) | 771 | WP_154320248.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GJD93_RS02500 (GJD93_02500) | pilP | 303405..303929 (+) | 525 | WP_104852650.1 | pilus assembly protein PilP | Machinery gene |
| GJD93_RS02505 (GJD93_02505) | pilQ | 303990..306140 (+) | 2151 | WP_171501118.1 | type IV pilus secretin PilQ | Machinery gene |
| GJD93_RS02510 (GJD93_02510) | aroK | 306178..306720 (+) | 543 | WP_004974468.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 23682.07 Da Isoelectric Point: 6.4746
>NTDB_id=400621 GJD93_RS02490 WP_004974461.1 302006..302641(+) (pilN) [Acinetobacter towneri strain 19110F47]
MAKINLLPWRDELREKRKKEFIVFCIAAAAVGVLLVALAWFFYNAKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPIAVRLVDELVRVTPSNMYLTKVSRTGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
KEENKDKAPSSVVPRVEESYGTFVVTSDLEEIAIPVTPTESNSTSAAGAAQ
MAKINLLPWRDELREKRKKEFIVFCIAAAAVGVLLVALAWFFYNAKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPIAVRLVDELVRVTPSNMYLTKVSRTGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
KEENKDKAPSSVVPRVEESYGTFVVTSDLEEIAIPVTPTESNSTSAAGAAQ
Nucleotide
Download Length: 636 bp
>NTDB_id=400621 GJD93_RS02490 WP_004974461.1 302006..302641(+) (pilN) [Acinetobacter towneri strain 19110F47]
ATGGCAAAGATTAACTTACTCCCTTGGCGCGATGAGCTAAGAGAAAAACGTAAAAAAGAATTTATTGTATTTTGTATTGC
AGCGGCTGCTGTTGGGGTGTTATTGGTGGCTTTGGCGTGGTTCTTCTACAACGCGAAGTTACAAGATCAAGAACAAGCCA
ATCAATTGGTGATCAGTACCAACCAAAACCTAGATGTACAATTAAAATCTTTAGAAGGCTTGCAAGAACAGCGTAATGCT
ATTGTTGAGCGCATGAAGCTTATTCAGGGCTTACAAAGTCAGCGTCCAATTGCCGTGCGTTTGGTGGATGAATTGGTGCG
TGTGACACCAAGCAATATGTACTTAACCAAAGTGAGCCGTACAGGCAATAAATTCACTTTTGAAGGCAAGGCTGAAAGTC
CAAATACTGTGGCTGAATTCTTGCGTAATTTGGAAGCATCGCCGTGGTATCGCAATGCATTTATGAATTCATTCTTAGCC
AAAGAAGAAAATAAAGATAAAGCACCAAGCTCTGTGGTTCCTCGTGTAGAGGAAAGTTACGGTACTTTTGTAGTAACTTC
AGATTTAGAAGAAATTGCAATTCCAGTAACACCAACAGAATCTAATTCAACATCAGCAGCGGGGGCAGCACAATGA
ATGGCAAAGATTAACTTACTCCCTTGGCGCGATGAGCTAAGAGAAAAACGTAAAAAAGAATTTATTGTATTTTGTATTGC
AGCGGCTGCTGTTGGGGTGTTATTGGTGGCTTTGGCGTGGTTCTTCTACAACGCGAAGTTACAAGATCAAGAACAAGCCA
ATCAATTGGTGATCAGTACCAACCAAAACCTAGATGTACAATTAAAATCTTTAGAAGGCTTGCAAGAACAGCGTAATGCT
ATTGTTGAGCGCATGAAGCTTATTCAGGGCTTACAAAGTCAGCGTCCAATTGCCGTGCGTTTGGTGGATGAATTGGTGCG
TGTGACACCAAGCAATATGTACTTAACCAAAGTGAGCCGTACAGGCAATAAATTCACTTTTGAAGGCAAGGCTGAAAGTC
CAAATACTGTGGCTGAATTCTTGCGTAATTTGGAAGCATCGCCGTGGTATCGCAATGCATTTATGAATTCATTCTTAGCC
AAAGAAGAAAATAAAGATAAAGCACCAAGCTCTGTGGTTCCTCGTGTAGAGGAAAGTTACGGTACTTTTGTAGTAACTTC
AGATTTAGAAGAAATTGCAATTCCAGTAACACCAACAGAATCTAATTCAACATCAGCAGCGGGGGCAGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
70.283 |
100 |
0.706 |
| comN | Acinetobacter baylyi ADP1 |
71.078 |
96.682 |
0.687 |