Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | GJD93_RS02500 | Genome accession | NZ_CP046045 |
| Coordinates | 303405..303929 (+) | Length | 174 a.a. |
| NCBI ID | WP_104852650.1 | Uniprot ID | - |
| Organism | Acinetobacter towneri strain 19110F47 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 298405..308929
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJD93_RS02485 (GJD93_02485) | pilM | 300948..302006 (+) | 1059 | WP_004974460.1 | pilus assembly protein PilM | Machinery gene |
| GJD93_RS02490 (GJD93_02490) | pilN | 302006..302641 (+) | 636 | WP_004974461.1 | PilN domain-containing protein | Machinery gene |
| GJD93_RS02495 (GJD93_02495) | comO | 302638..303408 (+) | 771 | WP_154320248.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GJD93_RS02500 (GJD93_02500) | pilP | 303405..303929 (+) | 525 | WP_104852650.1 | pilus assembly protein PilP | Machinery gene |
| GJD93_RS02505 (GJD93_02505) | pilQ | 303990..306140 (+) | 2151 | WP_171501118.1 | type IV pilus secretin PilQ | Machinery gene |
| GJD93_RS02510 (GJD93_02510) | aroK | 306178..306720 (+) | 543 | WP_004974468.1 | shikimate kinase AroK | - |
| GJD93_RS02515 (GJD93_02515) | aroB | 306739..307818 (+) | 1080 | WP_154320250.1 | 3-dehydroquinate synthase | - |
| GJD93_RS02520 (GJD93_02520) | - | 307829..308674 (+) | 846 | WP_154320251.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19153.36 Da Isoelectric Point: 7.1660
>NTDB_id=400623 GJD93_RS02500 WP_104852650.1 303405..303929(+) (pilP) [Acinetobacter towneri strain 19110F47]
MKIEKLSLALLATVLMVGCDSRIDAVNAQMAEIRNQPPLPIEPAPVFEPAPTFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLARQLQPLENYALESLTMKGSMRQNGQILALIQTPDGEIERIQRGSYMGVNHGRVVNITPTQIDLIEIIPDGREGY
VERPRSLVLIGPAP
MKIEKLSLALLATVLMVGCDSRIDAVNAQMAEIRNQPPLPIEPAPVFEPAPTFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLARQLQPLENYALESLTMKGSMRQNGQILALIQTPDGEIERIQRGSYMGVNHGRVVNITPTQIDLIEIIPDGREGY
VERPRSLVLIGPAP
Nucleotide
Download Length: 525 bp
>NTDB_id=400623 GJD93_RS02500 WP_104852650.1 303405..303929(+) (pilP) [Acinetobacter towneri strain 19110F47]
ATGAAAATTGAAAAGCTTTCGTTAGCCCTGTTGGCAACTGTATTAATGGTTGGTTGTGATTCGCGTATTGATGCGGTAAA
TGCACAAATGGCTGAAATTCGTAATCAGCCACCACTACCCATTGAACCTGCACCTGTGTTTGAGCCTGCACCAACCTTTA
ACTATGCAGCACACCAGCTCAAAAGCCCATTTATGCCAAGTTCATTGGCGGCAGAGCTTAAAATTATGGCAGGGAAGCGC
GTTTATCCGAACCTTGCTCGCCAGCTACAACCACTGGAAAATTACGCACTTGAGTCACTGACCATGAAAGGCAGTATGCG
TCAAAATGGTCAAATTTTGGCATTGATTCAAACACCTGATGGTGAAATTGAGCGTATCCAGCGTGGTAGCTATATGGGGG
TAAATCATGGTCGTGTGGTGAATATTACACCTACACAAATTGATTTAATCGAAATTATTCCAGATGGTCGTGAAGGTTAT
GTAGAACGTCCAAGAAGTTTAGTTTTAATTGGGCCTGCGCCATAA
ATGAAAATTGAAAAGCTTTCGTTAGCCCTGTTGGCAACTGTATTAATGGTTGGTTGTGATTCGCGTATTGATGCGGTAAA
TGCACAAATGGCTGAAATTCGTAATCAGCCACCACTACCCATTGAACCTGCACCTGTGTTTGAGCCTGCACCAACCTTTA
ACTATGCAGCACACCAGCTCAAAAGCCCATTTATGCCAAGTTCATTGGCGGCAGAGCTTAAAATTATGGCAGGGAAGCGC
GTTTATCCGAACCTTGCTCGCCAGCTACAACCACTGGAAAATTACGCACTTGAGTCACTGACCATGAAAGGCAGTATGCG
TCAAAATGGTCAAATTTTGGCATTGATTCAAACACCTGATGGTGAAATTGAGCGTATCCAGCGTGGTAGCTATATGGGGG
TAAATCATGGTCGTGTGGTGAATATTACACCTACACAAATTGATTTAATCGAAATTATTCCAGATGGTCGTGAAGGTTAT
GTAGAACGTCCAAGAAGTTTAGTTTTAATTGGGCCTGCGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
77.143 |
100 |
0.776 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
100 |
0.718 |