Detailed information NTG0039876

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACAV_RS18735
• Genome accession: NC_015138
• Coordinates: 4310331..4311626 (+)
• Length: 431 a.a.
• NCBI ID: WP_013596150.1
• Uniprot ID: -
• Organism: Paracidovorax avenae ATCC 19860
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4305331..4316626

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAV_RS18715 (Acav_3777)	coaD	4306191..4306694 (-)	504	WP_013596146.1	pantetheine-phosphate adenylyltransferase	-
ACAV_RS18720 (Acav_3778)	rsmD	4306832..4307461 (-)	630	WP_013596147.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACAV_RS18725 (Acav_3779)	-	4307458..4308756 (-)	1299	WP_225981722.1	pitrilysin family protein	-
ACAV_RS18730 (Acav_3780)	-	4308847..4310301 (-)	1455	WP_013596149.1	pitrilysin family protein	-
ACAV_RS18735 (Acav_3781)	pilA	4310331..4311626 (+)	1296	WP_013596150.1	signal recognition particle-docking protein FtsY	Machinery gene
ACAV_RS18740 (Acav_3782)	-	4311680..4312450 (-)	771	WP_013596151.1	SDR family oxidoreductase	-
ACAV_RS18745 (Acav_3783)	-	4312715..4315966 (+)	3252	WP_013596152.1	3-keto-5-aminohexanoate cleavage protein	-

Sequence

Protein

• Length: 431 a.a.
• Molecular weight: 44714.34 Da
• Isoelectric Point: 5.1606

>NTDB_id=39876 ACAV_RS18735 WP_013596150.1 4310331..4311626(+) (pilA) [Paracidovorax avenae ATCC 19860]
MFSFFKKKPTPAPAAETPSPVPADIAPALPDAMPVSMPAVPEAGPAAAEAPGTSGAPGAFGWLRNPFARPPAPQDPTAPV
PPQPGPVAAPMPAVPSPTAAPLPVPQAPELLPATTPPAMAATASEPLPEAGQERKGWLDRLKNGLRKTGTSIATVFTGTQ
ISDALYDELEEALLMADTGVKATEHLLQDLRQRVKEARATDPAAVKGLLADALADLLRPLEKPLEIGRHTPTVIMVAGVN
GAGKTTSIGKLTRHLATEGAAVLLAAADTFRAAAREQLGVWADRNTVEIVSQEGGDPAAVSFDAVSAGKARGKDVVLVDT
AGRLPTQLHLMQELQKIKRVITKADGTAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQE
RPIPVYFIGVGEKLEDLETFSAREFAQALLA

Nucleotide

• Length: 1296 bp

>NTDB_id=39876 ACAV_RS18735 WP_013596150.1 4310331..4311626(+) (pilA) [Paracidovorax avenae ATCC 19860]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCTGCTCCCGCTGCGGAGACCCCGTCCCCGGTACCGGCCGACATTGCCCC
GGCCCTGCCCGATGCCATGCCGGTCTCCATGCCCGCCGTGCCGGAGGCCGGACCTGCAGCCGCCGAAGCGCCAGGCACCT
CTGGAGCCCCCGGCGCTTTCGGCTGGCTGCGCAATCCGTTCGCCAGGCCCCCGGCTCCGCAGGATCCCACAGCGCCGGTT
CCACCACAGCCGGGCCCTGTGGCCGCTCCCATGCCGGCTGTGCCAAGCCCGACAGCGGCGCCGCTGCCTGTCCCCCAGGC
TCCAGAGCTCCTCCCCGCCACCACGCCGCCGGCAATGGCGGCCACCGCATCCGAGCCCTTGCCGGAAGCCGGGCAGGAGC
GCAAGGGCTGGCTGGACCGGCTCAAGAACGGGCTGCGCAAGACGGGCACCAGCATCGCCACCGTCTTCACCGGCACGCAG
ATCAGCGATGCGCTCTACGATGAACTCGAAGAGGCGCTGCTGATGGCGGACACGGGCGTCAAGGCCACCGAACACCTGCT
GCAGGATCTCCGGCAGCGCGTGAAGGAAGCGAGGGCCACCGATCCCGCGGCGGTCAAGGGACTGCTTGCCGATGCCCTGG
CGGACCTGCTGCGCCCGCTCGAGAAGCCCCTCGAGATCGGACGCCACACGCCCACCGTGATCATGGTGGCGGGCGTCAAC
GGTGCCGGCAAGACCACCTCCATCGGCAAGCTCACCAGGCACCTGGCCACCGAAGGCGCCGCGGTCCTGCTGGCGGCGGC
CGACACCTTCCGGGCCGCCGCGCGCGAGCAGCTCGGCGTGTGGGCCGACCGCAATACCGTGGAAATCGTGAGCCAGGAGG
GCGGCGATCCGGCCGCCGTGAGCTTCGATGCCGTGAGCGCCGGCAAGGCACGCGGCAAGGACGTGGTGCTGGTGGACACG
GCGGGCCGGTTGCCGACACAGCTCCACCTGATGCAGGAACTGCAGAAGATCAAGCGCGTCATCACCAAGGCCGATGGCAC
GGCGCCGCACGAGGTGCTGCTGGTGATCGACGGCAACACGGGCCAGAACGCACTCGCGCAGGTGCGGGCCTTCGACGACG
CACTGCAGCTCACCGGCCTCATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCAGCCATCGCGCAGGAG
CGCCCCATACCTGTGTATTTCATCGGCGTCGGCGAAAAGCTGGAAGACCTGGAAACCTTCAGCGCCCGCGAGTTCGCGCA
GGCGCTGCTCGCTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (150-213)

• SRP54-type protein, GTPase domain (SRP54) (231-430)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	47.404	100	0.487