Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   GII90_RS19070 Genome accession   NZ_CP045811
Coordinates   3694702..3694821 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain P9_B1     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3689702..3699821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII90_RS19045 (GII90_19045) albG 3689866..3690567 (+) 702 WP_003243391.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  GII90_RS19050 (GII90_19050) ywhL 3690573..3691949 (-) 1377 WP_003244415.1 YncE family protein -
  GII90_RS19055 (GII90_19055) ywhK 3691988..3693343 (-) 1356 WP_003227552.1 YncE family protein -
  GII90_RS21235 (GII90_19060) - 3693340..3693570 (-) 231 WP_009968328.1 hypothetical protein -
  GII90_RS19065 (GII90_19065) rapF 3693573..3694718 (+) 1146 WP_003227549.1 response regulator aspartate phosphatase RapF Regulator
  GII90_RS19070 (GII90_19070) phrF 3694702..3694821 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  GII90_RS19075 (GII90_19075) ywhH 3694920..3695393 (+) 474 WP_003227547.1 YbaK/EbsC family protein -
  GII90_RS19080 (GII90_19080) speB 3695425..3696297 (-) 873 WP_003227545.1 agmatinase -
  GII90_RS19085 (GII90_19085) speE 3696358..3697188 (-) 831 WP_003227543.1 spermidine synthase -
  GII90_RS19090 (GII90_19090) pbpG 3697390..3699465 (+) 2076 WP_003227540.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=397459 GII90_RS19070 WP_009968329.1 3694702..3694821(+) (phrF) [Bacillus subtilis strain P9_B1]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=397459 GII90_RS19070 WP_009968329.1 3694702..3694821(+) (phrF) [Bacillus subtilis strain P9_B1]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment