Detailed information NTG0397458

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: GII90_RS19065
• Genome accession: NZ_CP045811
• Coordinates: 3693573..3694718 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain P9_B1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3688573..3699718

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII90_RS19040 (GII90_19040)	albF	3688589..3689869 (+)	1281	WP_003242974.1	pitrilysin family protein	-
GII90_RS19045 (GII90_19045)	albG	3689866..3690567 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
GII90_RS19050 (GII90_19050)	ywhL	3690573..3691949 (-)	1377	WP_003244415.1	YncE family protein	-
GII90_RS19055 (GII90_19055)	ywhK	3691988..3693343 (-)	1356	WP_003227552.1	YncE family protein	-
GII90_RS21235 (GII90_19060)	-	3693340..3693570 (-)	231	WP_009968328.1	hypothetical protein	-
GII90_RS19065 (GII90_19065)	rapF	3693573..3694718 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
GII90_RS19070 (GII90_19070)	phrF	3694702..3694821 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
GII90_RS19075 (GII90_19075)	ywhH	3694920..3695393 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
GII90_RS19080 (GII90_19080)	speB	3695425..3696297 (-)	873	WP_003227545.1	agmatinase	-
GII90_RS19085 (GII90_19085)	speE	3696358..3697188 (-)	831	WP_003227543.1	spermidine synthase	-
GII90_RS19090 (GII90_19090)	pbpG	3697390..3699465 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=397458 GII90_RS19065 WP_003227549.1 3693573..3694718(+) (rapF) [Bacillus subtilis strain P9_B1]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=397458 GII90_RS19065 WP_003227549.1 3693573..3694718(+) (rapF) [Bacillus subtilis strain P9_B1]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572