Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | GAY96_RS04755 | Genome accession | NZ_CP045550 |
| Coordinates | 985594..985866 (-) | Length | 90 a.a. |
| NCBI ID | WP_265574502.1 | Uniprot ID | - |
| Organism | Venatoribacter cucullus strain ASxS5 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 980594..990866
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GAY96_RS04730 (GAY96_04695) | - | 981204..982121 (-) | 918 | WP_265574498.1 | MaoC/PaaZ C-terminal domain-containing protein | - |
| GAY96_RS04735 (GAY96_04700) | - | 982194..983333 (+) | 1140 | WP_265574499.1 | AraC family transcriptional regulator | - |
| GAY96_RS04740 (GAY96_04705) | - | 983392..984453 (+) | 1062 | WP_265574500.1 | DUF5610 domain-containing protein | - |
| GAY96_RS04745 (GAY96_04710) | - | 984523..984798 (+) | 276 | WP_228344632.1 | glutaredoxin family protein | - |
| GAY96_RS04750 (GAY96_04715) | - | 984814..985521 (+) | 708 | WP_265574501.1 | hypothetical protein | - |
| GAY96_RS04755 (GAY96_04720) | comEA | 985594..985866 (-) | 273 | WP_265574502.1 | ComEA family DNA-binding protein | Machinery gene |
| GAY96_RS04760 (GAY96_04725) | topA | 986074..988713 (-) | 2640 | WP_265574503.1 | type I DNA topoisomerase | - |
| GAY96_RS04765 (GAY96_04730) | - | 988939..989712 (+) | 774 | WP_265574504.1 | hypothetical protein | - |
| GAY96_RS04770 (GAY96_04735) | - | 989712..990605 (+) | 894 | WP_265574505.1 | 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase | - |
Sequence
Protein
Download Length: 90 a.a. Molecular weight: 9546.01 Da Isoelectric Point: 8.7376
>NTDB_id=394968 GAY96_RS04755 WP_265574502.1 985594..985866(-) (comEA) [Venatoribacter cucullus strain ASxS5]
MQWIKHLFAAILLSASLLAGAAEPTDAKININTASAAELSQLNGIGKAKAEAIVQFREQQGGFKSVDELTQIKGIGAAIV
DKNRARLTLE
MQWIKHLFAAILLSASLLAGAAEPTDAKININTASAAELSQLNGIGKAKAEAIVQFREQQGGFKSVDELTQIKGIGAAIV
DKNRARLTLE
Nucleotide
Download Length: 273 bp
>NTDB_id=394968 GAY96_RS04755 WP_265574502.1 985594..985866(-) (comEA) [Venatoribacter cucullus strain ASxS5]
ATGCAATGGATCAAGCATCTGTTCGCGGCCATCTTATTATCCGCCAGCCTGCTGGCCGGCGCCGCCGAACCCACTGACGC
AAAAATCAATATCAACACGGCCAGCGCCGCAGAGTTGTCGCAACTGAATGGTATTGGCAAAGCCAAAGCCGAAGCCATTG
TGCAATTCCGCGAACAACAGGGTGGTTTTAAATCTGTGGATGAGCTGACGCAGATTAAAGGCATCGGTGCGGCCATTGTG
GATAAAAACCGCGCACGTCTGACGCTGGAATAA
ATGCAATGGATCAAGCATCTGTTCGCGGCCATCTTATTATCCGCCAGCCTGCTGGCCGGCGCCGCCGAACCCACTGACGC
AAAAATCAATATCAACACGGCCAGCGCCGCAGAGTTGTCGCAACTGAATGGTATTGGCAAAGCCAAAGCCGAAGCCATTG
TGCAATTCCGCGAACAACAGGGTGGTTTTAAATCTGTGGATGAGCTGACGCAGATTAAAGGCATCGGTGCGGCCATTGTG
GATAAAAACCGCGCACGTCTGACGCTGGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
46.392 |
100 |
0.5 |
| comEA | Vibrio cholerae strain A1552 |
46.392 |
100 |
0.5 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.617 |
100 |
0.456 |
| comEA | Vibrio campbellii strain DS40M4 |
38.947 |
100 |
0.411 |
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
40 |
100 |
0.4 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
43.21 |
90 |
0.389 |
| comEA | Acinetobacter baylyi ADP1 |
53.846 |
72.222 |
0.389 |
| comEA | Legionella pneumophila strain ERS1305867 |
54.098 |
67.778 |
0.367 |
| comEA | Legionella pneumophila str. Paris |
54.098 |
67.778 |
0.367 |