Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   FIU87_RS09510 Genome accession   NZ_CP045403
Coordinates   1813777..1815021 (+) Length   414 a.a.
NCBI ID   WP_152444374.1    Uniprot ID   A0A5P9HLW6
Organism   Bacillus sp. THAF10     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1808777..1820021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIU87_RS09480 (FIU87_09750) - 1808814..1810097 (+) 1284 WP_152444369.1 pitrilysin family protein -
  FIU87_RS09485 (FIU87_09755) - 1810163..1810876 (+) 714 WP_301538671.1 SDR family oxidoreductase -
  FIU87_RS09490 (FIU87_09760) - 1810944..1811201 (+) 258 WP_152444371.1 DUF3243 domain-containing protein -
  FIU87_RS09495 (FIU87_09765) - 1811341..1812132 (+) 792 WP_152444372.1 DUF3388 domain-containing protein -
  FIU87_RS09500 (FIU87_09770) - 1812153..1813040 (+) 888 WP_152444373.1 RodZ domain-containing protein -
  FIU87_RS09505 (FIU87_09775) pgsA 1813154..1813735 (+) 582 WP_152446489.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  FIU87_RS09510 (FIU87_09780) cinA 1813777..1815021 (+) 1245 WP_152444374.1 competence/damage-inducible protein A Machinery gene
  FIU87_RS09515 (FIU87_09785) recA 1815430..1816473 (+) 1044 WP_152444375.1 recombinase RecA Machinery gene
  FIU87_RS09520 (FIU87_09790) rny 1816830..1818395 (+) 1566 WP_172971007.1 ribonuclease Y -
  FIU87_RS09525 (FIU87_09795) - 1818471..1819265 (+) 795 WP_152446491.1 TIGR00282 family metallophosphoesterase -
  FIU87_RS09530 (FIU87_09800) spoVS 1819416..1819676 (+) 261 WP_010193268.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 414 a.a.        Molecular weight: 45467.26 Da        Isoelectric Point: 5.2139

>NTDB_id=393800 FIU87_RS09510 WP_152444374.1 1813777..1815021(+) (cinA) [Bacillus sp. THAF10]
MAWKAEIIAVGSELLLGQICNTNAQFLSKQLAELGIDVYYHTVVGDNPKRLREAILTAQNRSNLLIFTGGLGPTKDDLTK
ETIADALGKKLTMDDDALTDIQAYFKKVNRSMSENNKKQALVLDGSTILPNTTGMAPGMALLDSDITYMLLPGPPKELQP
MFLQFARDYLLERLGMKEQIVSKVLRFYGIGESQLEADIEDLIDKQTNPTIAPLAGDHEVTLRLTAKHQSLAEANRLIDL
TESEIRNRVGEYLFGYDEDTIYSVLFQNIKESQYTLASAESLTGGLFAEKMTSFPGASNVIKGALVCYTNDVKENVLGVS
KETLEQEGAVSRKCALEMAESVKTMMKTDIGVSFTGVAGPEKLDNQPVGTVFIGIALPNKETIVHKLQLAGSRESIKHRT
AKSGCHLLLKELFK

Nucleotide


Download         Length: 1245 bp        

>NTDB_id=393800 FIU87_RS09510 WP_152444374.1 1813777..1815021(+) (cinA) [Bacillus sp. THAF10]
ATGGCATGGAAAGCGGAGATAATTGCGGTTGGCTCCGAACTATTACTAGGTCAAATTTGTAACACAAACGCCCAGTTTTT
GTCCAAACAATTAGCTGAACTTGGCATTGACGTATATTATCATACGGTGGTTGGCGATAACCCTAAAAGGCTGCGTGAAG
CAATACTCACCGCACAGAATCGTTCTAATTTACTCATTTTCACAGGGGGACTAGGGCCAACGAAGGATGATCTTACTAAA
GAGACAATTGCGGATGCCCTAGGAAAAAAGCTAACCATGGACGACGACGCTCTTACTGATATACAGGCTTATTTCAAAAA
AGTAAATCGGAGCATGAGTGAAAATAATAAGAAGCAGGCATTGGTTTTGGATGGCTCTACCATCCTCCCAAACACGACCG
GTATGGCTCCAGGAATGGCGTTACTTGATAGTGACATTACTTATATGCTTTTGCCTGGACCACCAAAGGAACTGCAGCCA
ATGTTTCTACAATTTGCAAGAGACTATTTATTAGAAAGACTCGGTATGAAGGAACAAATAGTCTCAAAGGTACTTCGTTT
CTATGGTATTGGTGAATCTCAGCTTGAAGCTGATATTGAAGATTTAATTGATAAGCAAACGAACCCAACCATCGCTCCTC
TAGCTGGTGATCATGAGGTAACACTTCGGCTTACGGCTAAGCATCAGTCTTTAGCGGAGGCAAACAGGTTGATTGACTTG
ACAGAGAGTGAGATAAGAAACAGAGTTGGAGAATATCTTTTCGGATATGATGAAGACACTATTTACTCTGTTTTATTTCA
GAATATTAAAGAGTCTCAATACACCCTAGCAAGCGCAGAAAGTTTAACAGGAGGCTTATTTGCTGAGAAAATGACCAGCT
TTCCTGGAGCTTCCAACGTTATCAAAGGTGCTTTAGTATGCTACACAAATGATGTTAAAGAAAACGTGCTTGGTGTTTCA
AAGGAAACGCTTGAGCAAGAAGGTGCTGTAAGCAGAAAATGCGCCTTGGAAATGGCCGAATCAGTAAAGACTATGATGAA
AACTGATATTGGCGTTAGCTTTACAGGTGTAGCTGGTCCCGAGAAGCTGGACAATCAACCCGTTGGTACCGTATTTATTG
GGATAGCTCTCCCCAATAAAGAGACCATTGTTCATAAGCTCCAACTTGCAGGGAGTAGAGAATCCATCAAACACAGAACA
GCTAAATCTGGTTGCCATTTACTATTAAAAGAACTCTTCAAATAG

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(261-411)

Probable molybdopterin binding domain (MoCF_biosynth)

(7-170)

Damage-inducible protein CinA KH domain (CinA_KH)

(182-255)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5P9HLW6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

59.658

98.792

0.589
  cinA Streptococcus mitis NCTC 12261

45.131

100

0.459
  cinA Streptococcus pneumoniae TIGR4

44.656

100

0.454
  cinA Streptococcus mitis SK321

44.418

100

0.452
  cinA Streptococcus pneumoniae Rx1

44.181

100

0.449
  cinA Streptococcus pneumoniae R6

44.181

100

0.449
  cinA Streptococcus pneumoniae D39

43.943

100

0.447
  cinA Streptococcus mutans UA159

44.527

97.101

0.432

Multiple sequence alignment