Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   BCELL_RS12025 Genome accession   NC_014829
Coordinates   2630823..2632079 (-) Length   418 a.a.
NCBI ID   WP_013489022.1    Uniprot ID   E6TS34
Organism   Evansella cellulosilytica DSM 2522     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2625823..2637079
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCELL_RS12010 (Bcell_2428) rny 2626028..2627593 (-) 1566 WP_013489019.1 ribonuclease Y -
  BCELL_RS12015 (Bcell_2429) recA 2627982..2629031 (-) 1050 WP_013489020.1 recombinase RecA Machinery gene
  BCELL_RS12020 (Bcell_2430) - 2629237..2630823 (-) 1587 WP_013489021.1 DEAD/DEAH box helicase -
  BCELL_RS12025 (Bcell_2431) cinA 2630823..2632079 (-) 1257 WP_013489022.1 competence/damage-inducible protein A Machinery gene
  BCELL_RS12030 (Bcell_2432) pgsA 2632101..2632679 (-) 579 WP_013489023.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  BCELL_RS12035 (Bcell_2433) - 2632923..2633816 (-) 894 WP_013489024.1 RodZ domain-containing protein -
  BCELL_RS12040 (Bcell_2434) - 2633835..2634608 (-) 774 WP_013489025.1 DUF3388 domain-containing protein -
  BCELL_RS12045 (Bcell_2435) - 2634804..2635052 (-) 249 WP_013489026.1 DUF3243 domain-containing protein -
  BCELL_RS12050 (Bcell_2436) - 2635134..2635865 (-) 732 WP_013489027.1 SDR family oxidoreductase -

Sequence

Protein


Download         Length: 418 a.a.        Molecular weight: 46585.06 Da        Isoelectric Point: 5.3826

>NTDB_id=39236 BCELL_RS12025 WP_013489022.1 2630823..2632079(-) (cinA) [Evansella cellulosilytica DSM 2522]
MNGEIIAVGSELLLGQIVNSNAKYLSEQLSYLGINIYYHSVVGDNDRRLSDVVKGSMDRSDIIILTGGLGPTKDDLTKES
VANTIGKTLVYDRETELKIENYFKQREREMTENNRKQAVILKGATVFPNDHGLACGMAVKVDGTTIILLPGPPSEMKPMF
ENYVIPYLRMIQNEQEFIESRILRFFGIGESQLVDEIDDILDNQSNPTVAPLASDGEVTLRLTVKGNDEQENSRLLNSLQ
NVILDRVGDYFYGQGEESLIHKLVNELKMNHKKISTAESLTGGLFAAQLTDIRGASQIFPGGIVTYSNDVKQLGLEINHS
FIKKEGAVSHACAKEMAVQIRKKMNSDYGISFTGVAGPDPLEGKRPGFVYIGISSNNKVESYELKLAGSRKNIRERTVKY
GAYFLLQWIRKEMEKVDE

Nucleotide


Download         Length: 1257 bp        

>NTDB_id=39236 BCELL_RS12025 WP_013489022.1 2630823..2632079(-) (cinA) [Evansella cellulosilytica DSM 2522]
GTGAATGGAGAAATTATCGCTGTAGGCTCAGAATTGTTGCTTGGGCAAATTGTAAACTCCAATGCCAAGTATTTATCAGA
ACAGTTATCGTACTTAGGTATAAATATATACTATCATTCGGTAGTCGGTGATAATGATCGTAGACTTTCTGATGTGGTTA
AAGGATCAATGGATAGGTCTGATATAATTATACTTACTGGTGGTTTAGGACCTACTAAGGATGACCTGACAAAAGAATCT
GTTGCTAATACTATAGGTAAAACGTTAGTTTACGATAGGGAAACAGAATTAAAAATTGAAAATTATTTCAAGCAAAGAGA
ACGAGAAATGACAGAAAATAATCGTAAACAGGCTGTTATTCTTAAAGGTGCAACGGTTTTTCCGAATGATCACGGTTTAG
CTTGTGGAATGGCAGTAAAGGTGGACGGCACTACCATTATTTTACTTCCTGGTCCACCAAGTGAAATGAAACCAATGTTT
GAAAATTATGTCATTCCATATTTAAGAATGATACAAAATGAACAAGAGTTTATCGAATCAAGAATACTTCGTTTCTTCGG
CATTGGAGAATCACAATTGGTTGATGAAATAGACGATATATTAGACAATCAATCAAATCCAACAGTTGCTCCTTTAGCCT
CCGATGGAGAAGTAACACTCAGATTAACGGTTAAAGGGAACGATGAGCAAGAAAATAGCCGTCTTCTCAATAGCCTTCAA
AATGTTATTCTTGATCGCGTTGGTGATTATTTTTATGGTCAAGGTGAAGAATCATTAATACATAAGCTTGTTAATGAGTT
GAAAATGAATCATAAAAAAATTTCTACAGCAGAAAGCCTGACAGGTGGACTATTCGCTGCGCAATTAACAGACATAAGAG
GAGCATCACAAATTTTTCCAGGTGGGATAGTTACTTACAGTAATGATGTGAAACAACTTGGATTAGAAATTAATCATTCT
TTTATAAAAAAGGAAGGCGCTGTTAGTCACGCATGTGCAAAGGAAATGGCCGTACAAATTCGTAAGAAAATGAATAGTGA
TTATGGTATCAGTTTTACTGGAGTAGCAGGACCTGATCCACTAGAAGGAAAACGACCAGGTTTCGTTTACATAGGTATCT
CATCAAATAACAAAGTAGAGAGCTATGAATTGAAACTTGCTGGGAGTCGAAAGAATATTAGAGAGCGTACTGTTAAATAT
GGAGCTTATTTTTTGTTACAATGGATACGTAAGGAAATGGAAAAGGTGGATGAATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(257-407)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E6TS34

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

53.171

98.086

0.522
  cinA Streptococcus mitis SK321

46.572

100

0.471
  cinA Streptococcus mitis NCTC 12261

46.099

100

0.467
  cinA Streptococcus pneumoniae TIGR4

45.863

100

0.464
  cinA Streptococcus pneumoniae Rx1

45.626

100

0.462
  cinA Streptococcus pneumoniae R6

45.626

100

0.462
  cinA Streptococcus pneumoniae D39

45.39

100

0.459
  cinA Streptococcus mutans UA159

45.363

95.455

0.433
  cinA Streptococcus suis isolate S10

40.051

93.78

0.376

Multiple sequence alignment