Detailed information NTG0391970

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: GBN93_RS16485
• Genome accession: NZ_CP045103
• Coordinates: 3422364..3423422 (-)
• Length: 352 a.a.
• NCBI ID: WP_087527293.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain AJ413
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3417364..3428422

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GBN93_RS16460 (GBN93_16515)	aroK	3417778..3418311 (-)	534	WP_062032260.1	shikimate kinase AroK	-
GBN93_RS16465 (GBN93_16520)	pilQ	3418349..3420427 (-)	2079	WP_234964931.1	type IV pilus secretin PilQ family protein	Machinery gene
GBN93_RS16470 (GBN93_16525)	pilP	3420447..3420974 (-)	528	WP_184117976.1	pilus assembly protein PilP	Machinery gene
GBN93_RS16475 (GBN93_16530)	pilO	3420974..3421711 (-)	738	WP_168158667.1	type 4a pilus biogenesis protein PilO	Machinery gene
GBN93_RS16480 (GBN93_16535)	pilN	3421708..3422364 (-)	657	WP_184117975.1	PilN domain-containing protein	Machinery gene
GBN93_RS16485 (GBN93_16540)	pilM	3422364..3423422 (-)	1059	WP_087527293.1	pilus assembly protein PilM	Machinery gene
GBN93_RS16490 (GBN93_16545)	ponA	3423588..3426116 (+)	2529	WP_234964932.1	penicillin-binding protein PBP1a	-
GBN93_RS16495 (GBN93_16550)	-	3426148..3426954 (-)	807	WP_234964933.1	putative RNA methyltransferase	-
GBN93_RS16500 (GBN93_16555)	mraY	3427024..3428142 (-)	1119	WP_004691502.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38951.52 Da
• Isoelectric Point: 4.4221

>NTDB_id=391970 GBN93_RS16485 WP_087527293.1 3422364..3423422(-) (pilM) [Acinetobacter johnsonii strain AJ413]
MLRLYRKPSKGLIGVDISSTSVKVLELSVKNNRYWVESYALVPLPEGSVVEKNILNPEAVGDALERAVNLANVQSTEVAL
AVPTSMVITKIIEMDADMNDDEREIQIRDDAEQYIPFPLDEASLDFEVLPDRLANPNRVNVLLVATRIENVEARAEALEL
GGLTPKIADVESFAIENAFKVFSDTLPMGVNTVGILDIGHTMTTLSVMQNNKVIYTREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKSRTLPDDYDIEVLEPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=391970 GBN93_RS16485 WP_087527293.1 3422364..3423422(-) (pilM) [Acinetobacter johnsonii strain AJ413]
GTGCTCAGGTTATATCGTAAGCCAAGTAAGGGGTTAATAGGAGTAGATATTAGTTCGACTTCTGTTAAGGTATTGGAACT
TTCTGTTAAAAACAATCGGTATTGGGTGGAGAGCTATGCACTAGTCCCATTACCAGAAGGAAGTGTGGTCGAAAAAAATA
TATTGAATCCAGAAGCAGTTGGTGATGCCCTTGAGCGTGCGGTAAATTTGGCCAATGTTCAATCGACAGAGGTAGCGCTG
GCAGTTCCGACATCTATGGTGATTACTAAAATCATTGAAATGGATGCGGATATGAACGATGACGAGCGTGAAATTCAGAT
TCGTGATGATGCTGAACAATATATTCCATTCCCATTAGATGAAGCGAGTTTGGATTTTGAAGTCCTTCCAGACCGTTTAG
CCAATCCCAATCGTGTCAATGTACTCCTCGTTGCAACCCGCATTGAAAATGTAGAGGCGCGTGCCGAAGCATTGGAGTTG
GGCGGTTTAACGCCTAAGATTGCCGATGTTGAAAGTTTCGCCATTGAAAATGCATTCAAGGTCTTTTCAGATACGCTTCC
AATGGGTGTAAACACCGTTGGGATTCTGGACATCGGTCATACCATGACCACCTTATCTGTCATGCAGAATAATAAAGTCA
TTTATACGCGTGAACAGGTATTCGGTGGTAAACAATTGACTCAAGAAATTCAAAACCGTTATGGTTTGTCTTTTGAAGAA
GCTGGACGTGCCAAAAAAAGCCGTACACTGCCTGACGACTATGATATTGAAGTGCTTGAACCCTTTCTTGAAGCTGTGGT
GCAACAAGCAGCACGCTCTTTGCAGTTCTTCTTTTCGTCCTCTCAATTTAATGAGATCGACCATATTTTATTGGCAGGGG
GGAATGCCAATATTCCAGGACTGGCGAAGTTATTACAACAAAAATTAGGTTATCGCGTCACCATTGCCAACCCATTTTTA
CAAATGGGCTTTTCTCCACAAATCGACATTAAAAAAATTGAAAATGATGCTTCATCACTCATGGTGGCATGTGGATTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	85.227	100	0.852
comM	Acinetobacter nosocomialis M2	85.227	100	0.852
comM	Acinetobacter baylyi ADP1	80.398	100	0.804
pilM	Legionella pneumophila strain ERS1305867	40.96	100	0.412