Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | GBN93_RS16470 | Genome accession | NZ_CP045103 |
| Coordinates | 3420447..3420974 (-) | Length | 175 a.a. |
| NCBI ID | WP_184117976.1 | Uniprot ID | - |
| Organism | Acinetobacter johnsonii strain AJ413 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3415447..3425974
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBN93_RS16450 (GBN93_16505) | - | 3415815..3416654 (-) | 840 | WP_234964930.1 | hypothetical protein | - |
| GBN93_RS16455 (GBN93_16510) | aroB | 3416662..3417747 (-) | 1086 | WP_159152653.1 | 3-dehydroquinate synthase | - |
| GBN93_RS16460 (GBN93_16515) | aroK | 3417778..3418311 (-) | 534 | WP_062032260.1 | shikimate kinase AroK | - |
| GBN93_RS16465 (GBN93_16520) | pilQ | 3418349..3420427 (-) | 2079 | WP_234964931.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| GBN93_RS16470 (GBN93_16525) | pilP | 3420447..3420974 (-) | 528 | WP_184117976.1 | pilus assembly protein PilP | Machinery gene |
| GBN93_RS16475 (GBN93_16530) | pilO | 3420974..3421711 (-) | 738 | WP_168158667.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GBN93_RS16480 (GBN93_16535) | pilN | 3421708..3422364 (-) | 657 | WP_184117975.1 | PilN domain-containing protein | Machinery gene |
| GBN93_RS16485 (GBN93_16540) | pilM | 3422364..3423422 (-) | 1059 | WP_087527293.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19337.54 Da Isoelectric Point: 7.1331
>NTDB_id=391967 GBN93_RS16470 WP_184117976.1 3420447..3420974(-) (pilP) [Acinetobacter johnsonii strain AJ413]
MKYQNLMLSLCVGLLLVGCDSRIDAVNMQMAEIRNQPPLPIEPAPDFPPVPTFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYAIESLNMKGSMRGQNGQILALIQTPDGEIERVQRGSYLGMNHGRVINITATQIDLIEIIPDGREG
YVERPRSLVLIGPAP
MKYQNLMLSLCVGLLLVGCDSRIDAVNMQMAEIRNQPPLPIEPAPDFPPVPTFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYAIESLNMKGSMRGQNGQILALIQTPDGEIERVQRGSYLGMNHGRVINITATQIDLIEIIPDGREG
YVERPRSLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=391967 GBN93_RS16470 WP_184117976.1 3420447..3420974(-) (pilP) [Acinetobacter johnsonii strain AJ413]
ATGAAATATCAAAATCTCATGCTTAGTCTCTGCGTAGGACTACTCCTTGTCGGTTGTGATTCACGTATTGATGCGGTCAA
TATGCAAATGGCTGAAATTCGTAATCAACCACCATTGCCGATTGAGCCTGCGCCAGATTTCCCACCTGTACCGACTTTTA
ATTATGCCGCGCATCAATTAAAGAGTCCGTTTATGCCAAGCTCATTAGCAGCTGAACTGAAAATTATGGCTGGAAAGCGT
GTTTATCCAAACTTATCTCGCCAATTACAACCTTTGGAAAGTTATGCGATTGAATCGCTTAACATGAAAGGCAGTATGCG
CGGGCAAAATGGACAAATTTTGGCGTTGATTCAAACACCTGATGGTGAAATTGAACGCGTGCAGCGTGGTAGTTATTTGG
GGATGAATCATGGTCGTGTGATTAATATCACCGCTACACAAATTGATTTGATTGAAATTATTCCGGATGGGCGTGAGGGC
TATGTCGAGCGCCCGAGAAGCCTAGTATTAATTGGGCCGGCGCCTTAA
ATGAAATATCAAAATCTCATGCTTAGTCTCTGCGTAGGACTACTCCTTGTCGGTTGTGATTCACGTATTGATGCGGTCAA
TATGCAAATGGCTGAAATTCGTAATCAACCACCATTGCCGATTGAGCCTGCGCCAGATTTCCCACCTGTACCGACTTTTA
ATTATGCCGCGCATCAATTAAAGAGTCCGTTTATGCCAAGCTCATTAGCAGCTGAACTGAAAATTATGGCTGGAAAGCGT
GTTTATCCAAACTTATCTCGCCAATTACAACCTTTGGAAAGTTATGCGATTGAATCGCTTAACATGAAAGGCAGTATGCG
CGGGCAAAATGGACAAATTTTGGCGTTGATTCAAACACCTGATGGTGAAATTGAACGCGTGCAGCGTGGTAGTTATTTGG
GGATGAATCATGGTCGTGTGATTAATATCACCGCTACACAAATTGATTTGATTGAAATTATTCCGGATGGGCGTGAGGGC
TATGTCGAGCGCCCGAGAAGCCTAGTATTAATTGGGCCGGCGCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
77.143 |
100 |
0.771 |
| comL | Acinetobacter baylyi ADP1 |
71.429 |
100 |
0.714 |