Detailed information NTG0390462

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: FSA28_RS09295
• Genome accession: NZ_CP044495
• Coordinates: 1847485..1847880 (-)
• Length: 131 a.a.
• NCBI ID: WP_002263454.1
• Uniprot ID: Q8DS68
• Organism: Streptococcus mutans strain UA140
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1842485..1852880

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FSA28_RS09270	-	1842536..1842739 (-)	204	Protein_1726	hypothetical protein	-
FSA28_RS09275 (FSA28_1617)	-	1842805..1844112 (-)	1308	WP_002263458.1	extracellular solute-binding protein	-
FSA28_RS09280 (FSA28_1618)	-	1844105..1844785 (-)	681	WP_002263457.1	response regulator transcription factor	-
FSA28_RS09285 (FSA28_1619)	-	1844785..1846107 (-)	1323	WP_002263456.1	sensor histidine kinase	-
FSA28_RS09290 (FSA28_1620)	-	1846107..1847069 (-)	963	WP_002280593.1	sugar ABC transporter substrate-binding protein	-
FSA28_RS09295 (FSA28_1621)	ssbA	1847485..1847880 (-)	396	WP_002263454.1	single-stranded DNA-binding protein	Machinery gene
FSA28_RS09300 (FSA28_1622)	-	1847967..1848323 (-)	357	WP_002291592.1	rhodanese-like domain-containing protein	-
FSA28_RS09305 (FSA28_1623)	-	1848323..1848745 (-)	423	WP_002291590.1	MarR family transcriptional regulator	-
FSA28_RS09310 (FSA28_1624)	ytpR	1848843..1849469 (-)	627	WP_002263451.1	YtpR family tRNA-binding protein	-
FSA28_RS09315 (FSA28_1625)	-	1849466..1849795 (-)	330	WP_002285056.1	thioredoxin family protein	-
FSA28_RS09320 (FSA28_1626)	-	1849773..1850081 (-)	309	WP_002263449.1	DUF4651 domain-containing protein	-
FSA28_RS09325 (FSA28_1627)	pepA	1850141..1851208 (+)	1068	WP_002291587.1	glutamyl aminopeptidase	-
FSA28_RS09330 (FSA28_1628)	proC	1851264..1852034 (+)	771	WP_002291585.1	pyrroline-5-carboxylate reductase	-
FSA28_RS09335 (FSA28_1629)	-	1852119..1852781 (-)	663	WP_002266816.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14841.90 Da
• Isoelectric Point: 6.4855

>NTDB_id=390462 FSA28_RS09295 WP_002263454.1 1847485..1847880(-) (ssbA) [Streptococcus mutans strain UA140]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGEKQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=390462 FSA28_RS09295 WP_002263454.1 1847485..1847880(-) (ssbA) [Streptococcus mutans strain UA140]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAAGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGTAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTAGAAGAGGAGGAACTCCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: Q8DS68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	100	100	1
ssbB	Streptococcus sobrinus strain NIDR 6715-7	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.756
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.748
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.748
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.733
ssbB	Lactococcus lactis subsp. cremoris KW2	58.036	85.496	0.496
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405