Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FSC11_RS01485 | Genome accession | NZ_CP044483 |
| Coordinates | 321676..322158 (+) | Length | 160 a.a. |
| NCBI ID | WP_420867677.1 | Uniprot ID | - |
| Organism | Acinetobacter schindleri strain HZE30-1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 316676..327158
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FSC11_RS01465 (FSC11_01470) | - | 317638..319059 (+) | 1422 | WP_163164728.1 | FAD-dependent oxidoreductase | - |
| FSC11_RS01470 (FSC11_01475) | - | 319244..319834 (+) | 591 | WP_163164730.1 | LemA family protein | - |
| FSC11_RS01475 (FSC11_01480) | - | 319864..320901 (+) | 1038 | WP_163164732.1 | TPM domain-containing protein | - |
| FSC11_RS01480 (FSC11_01485) | - | 320895..321455 (+) | 561 | WP_163164733.1 | TPM domain-containing protein | - |
| FSC11_RS01485 (FSC11_01490) | pilA | 321676..322158 (+) | 483 | WP_420867677.1 | pilin | Machinery gene |
| FSC11_RS01490 (FSC11_01495) | - | 322220..323908 (+) | 1689 | WP_163164737.1 | O-antigen ligase family protein | - |
| FSC11_RS01495 (FSC11_01500) | - | 323996..325633 (+) | 1638 | WP_163164739.1 | PglL family O-oligosaccharyltransferase | - |
| FSC11_RS01500 (FSC11_01505) | bfr | 325688..326152 (-) | 465 | WP_163164741.1 | heteropolymeric bacterioferritin subunit Bfr | - |
| FSC11_RS01505 (FSC11_01510) | - | 326394..326588 (-) | 195 | WP_005223443.1 | bacterioferritin-associated ferredoxin | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 16041.24 Da Isoelectric Point: 9.0789
>NTDB_id=390243 FSC11_RS01485 WP_420867677.1 321676..322158(+) (pilA) [Acinetobacter schindleri strain HZE30-1]
MQKGFTLIELMIVVAIIGILAAVAIPAYQDYTVRAKVTEGLSLASSAKTAVSENAANATAFGSGWTAPSATPNVSSVNIN
STNGRITITYTTAVAPANANTLVLSPLNGDRATGTALVKGVPPAAGSITWVCRSAGATTAVANAGAGTLESKYAPAECRN
MQKGFTLIELMIVVAIIGILAAVAIPAYQDYTVRAKVTEGLSLASSAKTAVSENAANATAFGSGWTAPSATPNVSSVNIN
STNGRITITYTTAVAPANANTLVLSPLNGDRATGTALVKGVPPAAGSITWVCRSAGATTAVANAGAGTLESKYAPAECRN
Nucleotide
Download Length: 483 bp
>NTDB_id=390243 FSC11_RS01485 WP_420867677.1 321676..322158(+) (pilA) [Acinetobacter schindleri strain HZE30-1]
ATGCAAAAGGGTTTTACTCTTATTGAATTAATGATTGTTGTAGCAATTATCGGTATTCTTGCTGCTGTAGCGATTCCTGC
TTATCAAGATTACACTGTACGTGCTAAAGTAACAGAAGGACTATCTTTGGCGTCATCTGCAAAGACTGCTGTTTCTGAAA
ATGCTGCAAATGCAACTGCTTTTGGTAGTGGTTGGACAGCGCCATCAGCAACACCAAACGTAAGTAGTGTAAATATTAAC
TCAACTAACGGTCGTATTACGATTACATATACTACAGCTGTTGCTCCAGCTAATGCTAATACATTAGTATTAAGTCCTTT
GAATGGAGATCGTGCAACTGGTACTGCTCTAGTAAAAGGTGTTCCACCTGCAGCTGGTTCAATTACATGGGTATGTCGTT
CTGCAGGTGCAACAACAGCTGTTGCTAATGCAGGAGCTGGTACGCTTGAATCTAAATATGCTCCAGCAGAATGCCGTAAC
TAA
ATGCAAAAGGGTTTTACTCTTATTGAATTAATGATTGTTGTAGCAATTATCGGTATTCTTGCTGCTGTAGCGATTCCTGC
TTATCAAGATTACACTGTACGTGCTAAAGTAACAGAAGGACTATCTTTGGCGTCATCTGCAAAGACTGCTGTTTCTGAAA
ATGCTGCAAATGCAACTGCTTTTGGTAGTGGTTGGACAGCGCCATCAGCAACACCAAACGTAAGTAGTGTAAATATTAAC
TCAACTAACGGTCGTATTACGATTACATATACTACAGCTGTTGCTCCAGCTAATGCTAATACATTAGTATTAAGTCCTTT
GAATGGAGATCGTGCAACTGGTACTGCTCTAGTAAAAGGTGTTCCACCTGCAGCTGGTTCAATTACATGGGTATGTCGTT
CTGCAGGTGCAACAACAGCTGTTGCTAATGCAGGAGCTGGTACGCTTGAATCTAAATATGCTCCAGCAGAATGCCGTAAC
TAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
56.024 |
100 |
0.581 |
| pilA2 | Legionella pneumophila str. Paris |
52.761 |
100 |
0.538 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
52.147 |
100 |
0.531 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
41.799 |
100 |
0.494 |
| comP | Acinetobacter baylyi ADP1 |
43.671 |
98.75 |
0.431 |
| pilE | Neisseria gonorrhoeae MS11 |
38.095 |
100 |
0.4 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
36.31 |
100 |
0.381 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
36.709 |
98.75 |
0.363 |